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..
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Abi
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Ace
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Affy
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BWA
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BioSQL
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Blast
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Blat
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CDAO
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Cellosaurus
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Clustalw
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CodonUsage
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Compass
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EMBL
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Emboss
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Entrez
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Enzymes
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Exonerate
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ExtendedPhylip
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FSSP
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Fasta
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GFF
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GenBank
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Geo
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Graphics
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Hmmer
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IntelliGenetics
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KEGG
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MAF
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MEME
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Medline
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MetaTool
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Motif
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NBRF
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NeXML
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NeuralNetwork
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Nexus
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PAML
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PDB
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Phd
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Phylip
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PhyloXML
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PopGen
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Prosite
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Quality
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Rebase
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Registry
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Roche
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SCOP
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Saf
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SamBam
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SeqXML
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Stockholm
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SubsMat
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SwissProt
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TreeConstruction
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UniGene
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UniProt
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Wise
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codonalign
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motifs
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output
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phenotype
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.coveragerc
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.cvsignore
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.flake8
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biosql.ini.sample
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common_BioSQL.py
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common_BioSQL_online.py
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requires_internet.py
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requires_wise.py
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run_tests.py
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search_tests_common.py
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seq_tests_common.py
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test_Ace.py
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test_Affy.py
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test_AlignIO.py
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test_AlignIO_ClustalIO.py
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test_AlignIO_EmbossIO.py
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test_AlignIO_FastaIO.py
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test_AlignIO_PhylipIO.py
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test_AlignIO_convert.py
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test_AlignInfo.py
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test_Application.py
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test_BWA_tool.py
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test_BioSQL_MySQLdb.py
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test_BioSQL_MySQLdb_online.py
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test_BioSQL_mysql_connector.py
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test_BioSQL_mysql_connector_online.py
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test_BioSQL_psycopg2.py
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test_BioSQL_psycopg2_online.py
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test_BioSQL_sqlite3.py
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test_BioSQL_sqlite3_online.py
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test_CAPS.py
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test_CelFile.py
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test_Chi2.py
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test_ClustalOmega_tool.py
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test_Clustalw_tool.py
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test_Cluster.py
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test_CodonTable.py
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test_CodonUsage.py
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test_ColorSpiral.py
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test_Compass.py
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test_Consensus.py
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test_Crystal.py
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test_DSSP_tool.py
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test_Dialign_tool.py
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test_DocSQL.py
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test_EMBL_unittest.py
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test_Emboss.py
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test_EmbossPhylipNew.py
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test_EmbossPrimer.py
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test_Entrez.py
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test_Entrez_online.py
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test_Entrez_parser.py
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test_Enzyme.py
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test_FSSP.py
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test_Fasttree_tool.py
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test_File.py
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test_GACrossover.py
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test_GAMutation.py
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test_GAOrganism.py
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test_GAQueens.py
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test_GARepair.py
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test_GASelection.py
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test_GenBank.py
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test_GenBank_unittest.py
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test_GenomeDiagram.py
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test_GraphicsBitmaps.py
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test_GraphicsChromosome.py
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test_GraphicsDistribution.py
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test_GraphicsGeneral.py
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test_HMMCasino.py
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test_HMMGeneral.py
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test_KDTree.py
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test_KEGG.py
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test_KEGG_online.py
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test_KGML_graphics.py
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test_KGML_graphics_online.py
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test_KGML_nographics.py
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test_KeyWList.py
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test_Location.py
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test_LogisticRegression.py
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test_MMCIF.py
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test_MSAProbs_tool.py
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test_MafIO_index.py
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test_Mafft_tool.py
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test_MarkovModel.py
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test_Medline.py
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test_Muscle_tool.py
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test_NACCESS_tool.py
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test_NCBITextParser.py
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test_NCBIXML.py
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test_NCBI_BLAST_tools.py
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test_NCBI_qblast.py
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test_NNExclusiveOr.py
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test_NNGene.py
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test_NNGeneral.py
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test_NaiveBayes.py
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test_Nexus.py
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test_PAML_baseml.py
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test_PAML_codeml.py
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test_PAML_tools.py
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test_PAML_yn00.py
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test_PDB.py
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test_PDBList.py
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test_PDB_KDTree.py
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test_ParserSupport.py
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test_Pathway.py
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test_Phd.py
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test_Phylo.py
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test_PhyloXML.py
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test_Phylo_CDAO.py
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test_Phylo_NeXML.py
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test_Phylo_matplotlib.py
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test_Phylo_networkx.py
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test_PopGen_DFDist.py
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test_PopGen_FDist.py
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test_PopGen_FDist_nodepend.py
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test_PopGen_FastSimCoal.py
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test_PopGen_GenePop.py
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test_PopGen_GenePop_EasyController.py
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test_PopGen_GenePop_nodepend.py
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test_PopGen_SimCoal.py
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test_PopGen_SimCoal_nodepend.py
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test_Prank_tool.py
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test_Probcons_tool.py
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test_ProtParam.py
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test_QCPSuperimposer.py
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test_RCSBFormats.py
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test_Restriction.py
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test_SCOP_Astral.py
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test_SCOP_Cla.py
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test_SCOP_Des.py
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test_SCOP_Dom.py
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test_SCOP_Hie.py
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test_SCOP_Raf.py
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test_SCOP_Residues.py
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test_SCOP_Scop.py
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test_SCOP_online.py
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test_SVDSuperimposer.py
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test_SearchIO_blast_tab.py
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test_SearchIO_blast_tab_index.py
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test_SearchIO_blast_text.py
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test_SearchIO_blast_xml.py
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test_SearchIO_blast_xml_index.py
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test_SearchIO_blat_psl.py
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test_SearchIO_blat_psl_index.py
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test_SearchIO_exonerate.py
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test_SearchIO_exonerate_text_index.py
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test_SearchIO_exonerate_vulgar_index.py
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test_SearchIO_fasta_m10.py
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test_SearchIO_fasta_m10_index.py
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test_SearchIO_hmmer2_text.py
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test_SearchIO_hmmer2_text_index.py
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test_SearchIO_hmmer3_domtab.py
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test_SearchIO_hmmer3_domtab_index.py
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test_SearchIO_hmmer3_tab.py
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test_SearchIO_hmmer3_tab_index.py
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test_SearchIO_hmmer3_text.py
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test_SearchIO_hmmer3_text_index.py
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test_SearchIO_model.py
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test_SearchIO_write.py
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test_SeqFeature.py
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test_SeqIO.py
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test_SeqIO_AbiIO.py
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test_SeqIO_FastaIO.py
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test_SeqIO_Insdc.py
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test_SeqIO_PdbIO.py
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test_SeqIO_QualityIO.py
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test_SeqIO_SeqXML.py
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test_SeqIO_convert.py
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test_SeqIO_features.py
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test_SeqIO_index.py
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test_SeqIO_online.py
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test_SeqIO_write.py
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test_SeqRecord.py
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test_SeqUtils.py
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test_Seq_objs.py
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test_SffIO.py
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test_SubsMat.py
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test_SwissProt.py
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test_TCoffee_tool.py
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test_TogoWS.py
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test_TreeConstruction.py
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test_Tutorial.py
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test_UniGene.py
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test_Uniprot.py
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test_Wise.py
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test_XXmotif_tool.py
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test_align.py
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test_bgzf.py
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test_cellosaurus.py
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test_codonalign.py
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test_geo.py
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test_kNN.py
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test_lowess.py
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test_mmtf.py
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test_motifs.py
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test_motifs_online.py
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test_pairwise2.py
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test_phenotype.py
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test_phenotype_fit.py
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test_phyml_tool.py
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test_prodoc.py
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test_prosite1.py
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test_prosite2.py
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test_psw.py
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test_raxml_tool.py
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test_samtools_tool.py
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test_seq.py
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test_translate.py
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test_trie.py
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