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flo-compbio's
repositories
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data
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output
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010 - Loading and saving expression data.ipynb
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020 - Importing data from Scanpy and exporting data to Scanpy.ipynb
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030 - Visualizing data with t-SNE.ipynb
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040 - Clustering data with Galapagos (t-SNE plus DBSCAN).ipynb
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060 - Denoising data with ENHANCE.ipynb
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070 - Train a Monet model (for integrative analyses).ipynb
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080 - Plot a batch-corrected t-SNE using mutual nearest neighbors (Haghverdi et al., 2018).ipynb
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090 - Label transfer using K-nearest neighbor classification.ipynb
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clustering.ipynb
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README.md
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