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..
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broken_genbank_files
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subfolder
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format_sequences.ipynb
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jupyter_test_repr.ipynb
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save_changed_seq.ipynb
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.coveragerc
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02-G1_B01_013.ab1
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1362_6.ape
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15405_2.ape
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28-1rev_D04_026.ab1
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32-3rev_H04_018.ab1
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36-5rev_D05_041.ab1
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8054_2.ape
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AAA_OLD.gb
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ABI01.abi
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AJ515744.gb
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AJ515746.gb
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AJ580803.gb
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AJ580804.gb
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AM086621.gb
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AX023560.gb
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E05006.gb
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G.txt
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GIN11M86.gb
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GUP1_locus.gb
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GUP1rec1sens.txt
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GUP1rec2AS.txt
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Ggatcc (copy).gb
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Ggatcc.gb
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KlLEU2tt.fas
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KlLEU2tt.gb
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New_DNA.gb
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New_DNA__________________.gb
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RefDataBjorn.fas
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SYNPUC19CV.gb
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X06035.ape
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X60065-100-110.gb
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X60065.gb
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XKS1_orf.txt
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YEp24PGK.txt
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YEp24PGK_.txt
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YEp24PGK_XK_manually_assembled.txt
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YLACC1_locus.gb
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_.gb
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___test_module_myprimers_gdoc.py___
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__getenv.txt
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_test_module_genbank2.py_
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conftest.py
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dna2943.gb
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dna2943_mod.gb
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figures.odt
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foo
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jupyter_test_repr (copy).ipynb________
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lambda.gb
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my_test_enzymes.txt
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myseq.gb
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nucleotide1.xml
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output.file
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pAG25.gb
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pAG32.gb
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pCAPs-AjiI.gb
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pCAPs-pSU0.gb
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pCAPs.gb
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pCAPs_fasta (copy).txt
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pCAPs_fasta.txt
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pCAPs_lowgc.gb
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pCR_MCT1_HA46.gb
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pGREG505.gb
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pGSHU 7180bp.gb
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pGSKU 6961bp.gb
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pGUP1_correct.gb
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pGUP1_not_synced.gb
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pKT127______.ape
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pMEC1135.gb
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pMX4blaster2_old.gb
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pUC19-BamHI-a-rc.gb
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pUC19-BamHI-a.gb
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pUC19-EcoRI_PstI-d-rc.gb
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pUC19-SmaI-a.gb
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pUC19.gb
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pUC19_M77789.gb
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pUC19_MarkBudde.gb
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pUC19_fasta.txt
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pUC19_small_gene.gb
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pUC_LAC4.gb
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pUC_LAC4_correct_rotation.gb
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pYPK0_TDH3_GAL2_PGI1.gb
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pYPKa.gb
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pYPKp7.gb
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primer1.txt
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primer3.txt
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primers.fas
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primers_linux_line_endings.txt
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primers_linux_line_endings_not_unique.txt
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profile.pstat
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pth1.txt
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pth2.txt
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pthx.txt
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pydna_gel.png
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pydna_gel2.png
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pydna_read_test.txt
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pydna_read_test2.txt
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pydna_read_test3.txt
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read1.gb
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read2.gb
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read3.fasta
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read4.fasta
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run_assembly_tests.sh
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|
run_pytest_with_coverage.sh
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sequence.gb
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test
|
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test_USERcloning.py
|
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test_extra_cut_features.py
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test_extra_markbudde.py
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test_extra_santirdnd_bug_spanning_features.py
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|
test_longerlocus_name_gives_dseq.py
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|
test_module___init__.py
|
|
test_module__pretty.py
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|
test_module__thermodynamic_data.py
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|
test_module_all.py
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test_module_amplicon.py
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|
test_module_amplify.py
|
|
test_module_assembly.py
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|
test_module_common_sub_strings.py
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test_module_contig.py
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test_module_crispr.py
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test_module_design.py
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test_module_download.py
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test_module_dseq.py
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test_module_dseqrecord.py
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test_module_editor.py
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test_module_fakeseq.py
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test_module_fusionpcr.py
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|
test_module_gel.py
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|
test_module_genbank.py
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test_module_genbankfile.py
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test_module_genbankfixer.py
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|
test_module_genbankrecord.py
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test_module_ligate.py
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|
test_module_myenzymes.py
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|
test_module_myprimers.py
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|
test_module_parsers.py
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test_module_primer.py
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test_module_readers.py
|
|
test_module_seq.py
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test_module_seqrecord.py
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test_module_tm.py
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test_module_utils.py
|
