Searching for info on AMP-activated protein kinase in oysters / qDOD¶

SQLShare¶

SELECT * 
  FROM [sr320@washington.edu].[qDOD Cgigas Gene Descriptions (Swiss-prot)]
  where Description like '%AMP-activated%'

CGI_ID|SPID|evalue|Description
CGI_10003983|Q28948|0|5'-AMP-activated protein kinase catalytic subunit alpha-2
CGI_10010273|Q91WG5|4E-36|5'-AMP-activated protein kinase subunit gamma-2
CGI_10010275|Q91WG5|1E-128|5'-AMP-activated protein kinase subunit gamma-2
CGI_10016569|Q9QZH4|2E-09|5'-AMP-activated protein kinase subunit beta-2
CGI_10021816|Q5RDH5|5E-15|5'-AMP-activated protein kinase catalytic subunit alpha-1
CGI_10025389|Q6PAM0|3E-84|5'-AMP-activated protein kinase subunit beta-2

Emma's Proteomic Data¶

SELECT * FROM [sr320@washington.edu].[OABS_ETS_S3]
Where [Gene Name] like '%AMP-activated protein kinase%'

Q6PAM0
3e-84
5'-AMP-activated protein kinase subunit beta-2

OsHV¶

SELECT * FROM [sr320@washington.edu].[Cgigas Larvae RNA-Seq OsHV]
  where ID like 'CGI_10003983'

more on CGI_10003983¶

SELECT * FROM [sr320@washington.edu].[qDOD_v9_gene]
  where Column9 like '%CGI_10003983%'

IGV Genome Browser¶

Loading session http://eagle.fish.washington.edu/cnidarian/oyster_v9_igv_session.xml

Oyster Genome Browser¶