Notebook
In order to get enrichment you need to rely on SPID or other (here we use SPID as we have it). This means a simple join to get SPID that correspond to table above
!cat fish546_DEGjoinSPonly.txt
Now need to upload Backgroung list (all corresponding IDs in oyster genome)
!cat Cgigas_allSP.txt
comp42267_c0_seq1 comp27506_c0_seq1 comp31078_c0_seq1 comp42994_c1_seq12 comp43376_c0_seq11 comp43684_c0_seq63 comp43850_c0_seq2 comp23647_c0_seq1 comp37750_c2_seq5 comp14218_c0_seq1 comp38365_c0_seq23 comp42326_c1_seq2 comp42897_c0_seq4 comp41990_c0_seq3 comp39888_c0_seq2 comp41088_c0_seq3 comp22830_c0_seq1 comp33776_c1_seq2 comp9895_c0_seq2 comp34272_c0_seq1 comp43741_c0_seq9 comp19578_c0_seq1 comp28371_c1_seq1 comp44708_c0_seq2 comp38094_c0_seq2 comp46998_c0_seq1 comp7324_c0_seq1 comp30573_c0_seq1 comp42812_c1_seq2 comp40434_c1_seq2 comp38128_c0_seq1 comp37019_c0_seq1 comp29092_c0_seq2 comp43755_c0_seq29 comp36701_c0_seq7 comp39792_c1_seq4 comp44757_c0_seq12 comp41431_c0_seq1 comp42010_c0_seq2 comp38830_c0_seq3 comp41430_c0_seq1 comp19258_c0_seq1 comp34994_c0_seq1 comp37019_c0_seq9 comp35574_c1_seq2 comp7357_c0_seq1 comp33776_c1_seq3 comp9790_c0_seq2 comp30947_c0_seq1 comp10747_c0_seq1 comp28235_c0_seq1 comp30920_c0_seq1 comp30920_c1_seq1 comp33014_c0_seq7 comp34795_c4_seq2 comp44292_c0_seq1 comp43755_c0_seq14 comp40760_c0_seq3 comp39494_c0_seq7 comp40881_c2_seq3 comp43800_c0_seq2 comp43937_c0_seq7 comp44612_c0_seq13 comp40727_c0_seq1 comp35003_c0_seq2 comp38767_c1_seq4 comp28714_c1_seq1 comp33568_c0_seq2 comp36518_c0_seq7 comp43171_c0_seq2 comp41734_c0_seq1 comp38114_c0_seq2 comp44603_c0_seq5 comp42486_c0_seq1 comp35826_c3_seq1 comp35864_c0_seq3 comp36501_c1_seq2 comp9904_c0_seq1 comp44992_c0_seq1 comp33559_c0_seq2 comp39175_c0_seq4 comp42186_c0_seq7 comp25575_c0_seq1 comp36140_c0_seq1 comp7810_c0_seq1 comp40947_c0_seq2 comp44325_c2_seq1 comp37915_c0_seq2 comp38004_c0_seq1 comp16665_c0_seq1 comp30134_c0_seq1 comp34952_c0_seq1 comp37019_c0_seq14 comp18651_c1_seq1 comp39943_c0_seq3 comp39216_c0_seq1 comp26913_c0_seq4 comp44542_c1_seq2 comp42117_c0_seq2 comp38371_c0_seq1 comp39745_c1_seq10 comp42837_c1_seq2 comp37098_c0_seq5 comp23692_c0_seq2 comp40869_c0_seq2 comp11822_c0_seq1 comp40954_c0_seq1 comp30027_c0_seq1 comp36832_c0_seq1 comp46105_c0_seq1 comp41537_c0_seq5 comp38489_c0_seq2 comp38316_c0_seq1 comp39573_c0_seq3 comp37098_c0_seq7 comp37430_c6_seq1 comp44721_c0_seq5 comp30821_c0_seq3 comp36096_c1_seq2 comp41426_c1_seq3 comp43937_c0_seq5 comp44825_c0_seq2 comp38562_c2_seq4 comp29985_c0_seq1 comp44175_c0_seq9 comp28031_c0_seq1 comp42897_c0_seq7 comp24054_c1_seq1 comp39365_c0_seq10 comp40252_c2_seq4 comp42897_c0_seq5 comp37359_c0_seq1 comp20796_c1_seq1 comp22241_c0_seq1 comp22723_c0_seq1 comp31492_c0_seq3 comp36183_c1_seq1 comp36849_c3_seq1 comp10314_c0_seq1 comp23359_c0_seq2 comp38801_c1_seq7 comp46088_c0_seq1 comp38176_c0_seq1 comp39569_c0_seq1 comp42004_c0_seq1 comp27215_c0_seq1 comp26537_c0_seq3 comp43766_c3_seq1 comp36804_c4_seq9 comp34249_c2_seq1 comp46035_c0_seq1 comp44200_c0_seq12 comp31563_c0_seq2 comp46089_c0_seq1 comp27903_c0_seq1 comp42005_c0_seq5 comp20379_c0_seq1 comp41153_c1_seq2 comp41861_c0_seq8 comp44076_c0_seq18 comp41709_c1_seq5 comp40221_c0_seq2 comp30876_c0_seq1 comp37208_c0_seq5 comp42410_c0_seq3 comp37788_c0_seq2 comp7811_c0_seq1 comp44684_c0_seq2 comp19258_c3_seq1 comp39776_c0_seq4 comp32996_c0_seq11 comp31314_c0_seq1 comp36096_c1_seq1 comp41407_c0_seq1 comp40252_c1_seq1 comp41557_c0_seq5 comp38611_c0_seq21 comp41352_c1_seq2 comp31534_c1_seq1 comp42401_c0_seq2 comp34365_c0_seq2 comp35587_c0_seq1 comp33091_c2_seq2 comp35782_c0_seq2 comp25748_c0_seq1 comp38972_c0_seq2 comp10314_c0_seq2 comp15683_c0_seq1 comp41118_c0_seq2 comp43196_c0_seq3 comp43376_c1_seq1 comp44545_c1_seq1 comp47715_c0_seq1 comp37822_c0_seq1 comp39193_c0_seq2 comp36859_c0_seq1 comp41972_c4_seq8 comp7160_c0_seq1 comp41218_c1_seq13