import util
import os
from IPython.core.display import Markdown
benchmark = 'quasicrystal'
Markdown(open(os.path.join(benchmark, 'README.md'), 'r').read())
The quasicrystal benchmark runs a system of particles with an oscillatory pair potential that forms an icosahedral quasicrystal. This model is used in the research article: Engel M, et. al. (2015) Computational self-assembly of a one-component icosahedral quasicrystal, Nature materials 14(January), p. 109-116,
Parameters:
Performance results are reported in hours to complete ten million time steps.
rows = util.read_rows(benchmark)
table = util.make_table(rows)
Markdown(table)
Date | System | Compiler | CUDA | HOOMD | Precision | N | CPU | GPU | Ranks | Time for 10e6 steps (hours) |
---|---|---|---|---|---|---|---|---|---|---|
2018/01/15 | comet | gcc 4.9.2 | 8.0 | 2.2.2 | double | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v4 @ 2.40GHz | Tesla P100-PCIE-16GB | 1 | 3.45 |
2016/10/23 | psg | gcc 4.8.5 | 8.0 | 2.1.1 | double | 100,000 | Intel(R) Xeon(R) CPU E5-2698 v3 @ 2.30GHz | Tesla P100-PCIE-16GB | 1 | 3.27 |
2016/10/23 | psg | gcc 4.8.5 | 8.0 | 2.1.1 | double | 100,000 | Intel(R) Xeon(R) CPU E5-2698 v3 @ 2.30GHz | Tesla K80 | 1 | 10.07 |
2016/10/23 | psg | gcc 4.8.5 | 8.0 | 2.1.1 | double | 100,000 | Intel(R) Xeon(R) CPU E5-2698 v3 @ 2.30GHz | Tesla K40m | 1 | 10.93 |
2016/10/23 | psg | gcc 4.8.5 | 8.0 | 2.1.1 | double | 100,000 | Intel(R) Xeon(R) CPU E5-2698 v3 @ 2.30GHz | Tesla M40 24GB | 1 | 18.58 |
2016/10/12 | psg | gcc 4.8.5 | 8.0 | 2.1.0 | double | 100,000 | Intel(R) Xeon(R) CPU E5-2698 v3 @ 2.30GHz | Tesla P100-PCIE-16GB | 1 | 3.34 |
2016/10/12 | psg | gcc 4.8.5 | 8.0 | 2.1.0 | double | 100,000 | Intel(R) Xeon(R) CPU E5-2698 v3 @ 2.30GHz | Tesla K80 | 1 | 10.22 |
2016/10/13 | psg | gcc 4.8.5 | 7.5 | 2.1.0 | double | 100,000 | Intel(R) Xeon(R) CPU E5-2698 v3 @ 2.30GHz | Tesla K40m | 1 | 11.64 |
2016/10/13 | psg | gcc 4.8.5 | 7.5 | 2.1.0 | double | 100,000 | Intel(R) Xeon(R) CPU E5-2698 v3 @ 2.30GHz | Tesla M40 24GB | 1 | 19.53 |
2016/09/13 | collins | gcc 4.8.5 | 7.5 | 2.0.3 | double | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | Tesla K40c | 1 | 10.27 |
2016/09/13 | collins | gcc 4.8.5 | 7.5 | 2.0.3 | double | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | TITAN X | 1 | 11.28 |
2016/09/13 | collins | gcc 4.8.5 | 7.5 | 2.0.3 | double | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | Quadro M6000 | 1 | 21.24 |
2016/09/13 | collins | gcc 4.8.5 | 7.5 | 2.0.3 | double | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | GeForce GTX 680 | 1 | 31.29 |
2015/12/14 | collins | gcc 4.9.3 | 7.5 | 1.3.0 | single | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | Quadro M6000 | 1 | 5.51 |
2015/12/14 | collins | gcc 4.9.3 | 7.5 | 1.3.0 | single | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | Tesla K40c | 1 | 8.28 |
2015/12/14 | collins | gcc 4.9.3 | 7.5 | 1.3.0 | double | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | Tesla K40c | 1 | 10.70 |
2015/12/14 | collins | gcc 4.9.3 | 7.5 | 1.3.0 | single | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | GeForce GTX 680 | 1 | 15.79 |
2015/12/14 | collins | gcc 4.9.3 | 7.5 | 1.3.0 | double | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | Quadro M6000 | 1 | 22.75 |
2015/12/14 | collins | gcc 4.9.3 | 7.5 | 1.3.0 | single | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | Tesla C2070 | 1 | 23.29 |
2015/12/14 | collins | gcc 4.9.3 | 7.5 | 1.3.0 | double | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | Tesla C2070 | 1 | 31.43 |
2015/12/14 | collins | gcc 4.9.3 | 7.5 | 1.3.0 | double | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | GeForce GTX 680 | 1 | 32.27 |
2015/12/14 | collins | gcc 4.9.3 | 7.5 | 1.2.1 | single | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | Quadro M6000 | 1 | 5.23 |
2015/12/14 | collins | gcc 4.9.3 | 7.5 | 1.2.1 | single | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | Tesla K40c | 1 | 8.45 |
2015/12/14 | collins | gcc 4.9.3 | 7.5 | 1.2.1 | single | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | GeForce GTX 680 | 1 | 16.18 |
2015/12/14 | collins | gcc 4.9.3 | 7.5 | 1.2.1 | single | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | Tesla C2070 | 1 | 23.54 |
2015/12/14 | collins | gcc 4.9.3 | 7.5 | 1.1.1 | single | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | Quadro M6000 | 1 | 3.18 |
2015/12/14 | collins | gcc 4.9.3 | 7.5 | 1.1.1 | single | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | Tesla K40c | 1 | 4.84 |
2015/12/14 | collins | gcc 4.9.3 | 7.5 | 1.1.1 | single | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | GeForce GTX 680 | 1 | 7.05 |
2015/12/14 | collins | gcc 4.9.3 | 7.5 | 1.1.1 | single | 100,000 | Intel(R) Xeon(R) CPU E5-2680 v2 @ 2.80GHz | Tesla C2070 | 1 | 13.05 |
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