ISB-CGC Community Notebooks

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Title:   How to find a tool using GA4GH Tool Repository Service (TRS)
Author:  Kawther Abdilleh
Created: 2019-06-14
Purpose: Demonstrate how to use the GA4GH TRS API to find dockerized tools

How to find a tool using GA4GH Tool Repository Service (TRS)

The Global Alliance for Genomics and Health (GA4GH) is an international coalition, formed to enable the sharing of genomic and clinical data. One of the things that GA4GH makes available is the ability to find and use tools using their GA4GH Tool Registry Service (TRS) API. The GA4GH TRS API is a standard for listing and describing available tools (both stand-alone, Docker-based tools as well as workflows in CWL, WDL or Nextflow) in a given registry (like Dockstore, BioContainers, and Agora).

In this notebook, we'll explore how to use the GA4GH TRS API to find tools of interest from the Dockstore.

https://dockstore.org/api/static/swagger-ui/index.html#/GA4GHV1

First, let's authenticate ourselves

In [ ]:
from google.colab import auth
auth.authenticate_user()
print('Authorized')

Using the GET command on the endpoint 'api/ga4gh/v1/tools' returns all tools available or a filtered subset using metadata query parameters.

As an example, let's run this command to return a list of tools that we can use to get stats on bam files, (the bamstats tool)

In [1]:
!curl -X GET "https://dockstore.org/api/api/ga4gh/v1/tools?name=bamstats" > test_bamstats_from_ga4gh_api.json
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100 16299    0 16299    0     0   4310      0 --:--:--  0:00:03 --:--:--  4310
In [2]:
!head test_bamstats_from_ga4gh_api.json
[{"author":"Andrew Duncan","contains":[],"description":"![build_status](https://quay.io/repository/collaboratory/dockstore-tool-bamstats/status)\nA Docker container for the BAMStats command. See the [BAMStats](http://bamstats.sourceforge.net/) website for more information.\n","id":"quay.io/briandoconnor/dockstore-tool-bamstats","meta-version":"2018-03-16 18:17:22.117","organization":"briandoconnor","signed":false,"toolclass":{"description":"CommandLineTool","id":"0","name":"CommandLineTool"},"toolname":"dockstore-tool-bamstats","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fbriandoconnor%2Fdockstore-tool-bamstats","verified":false,"verified-source":"[]","versions":[{"descriptor-type":[],"dockerfile":true,"id":"quay.io/briandoconnor/dockstore-tool-bamstats:1.25","image":"f833711731fd1cf41b3c9ba79ae35a0517e7b8a4f2f82f6752ac58b812b8d246","meta-version":"2015-10-26 23:39:50.0","name":"1.25","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fbriandoconnor%2Fdockstore-tool-bamstats/versions/1.25","verified":false,"verified-source":""},{"descriptor-type":[],"dockerfile":true,"id":"quay.io/briandoconnor/dockstore-tool-bamstats:1.25-1","image":"f833711731fd1cf41b3c9ba79ae35a0517e7b8a4f2f82f6752ac58b812b8d246","meta-version":"2015-10-26 23:58:45.0","name":"1.25-1","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fbriandoconnor%2Fdockstore-tool-bamstats/versions/1.25-1","verified":false,"verified-source":""},{"descriptor-type":[],"dockerfile":true,"id":"quay.io/briandoconnor/dockstore-tool-bamstats:1.25-2","image":"4b4463a53c5ec29b0cf32946d5c90a7f298bde4c130838131dfe8e66bd136799","meta-version":"2015-11-03 17:48:53.0","name":"1.25-2","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fbriandoconnor%2Fdockstore-tool-bamstats/versions/1.25-2","verified":false,"verified-source":""},{"descriptor-type":[],"dockerfile":true,"id":"quay.io/briandoconnor/dockstore-tool-bamstats:1.25-3","image":"e915f98bd86bd84e413aaee2af8ed00e70d839f601f42ba80643d91f16914e9b","meta-version":"2016-06-16 03:01:11.0","name":"1.25-3","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fbriandoconnor%2Fdockstore-tool-bamstats/versions/1.25-3","verified":false,"verified-source":""},{"descriptor-type":[],"dockerfile":true,"id":"quay.io/briandoconnor/dockstore-tool-bamstats:1.25-4","image":"882d9572cb96c69927d9fc295afd71b6ad6af33ce42161c14345f6a302fd8f7f","meta-version":"2016-06-16 17:04:35.0","name":"1.25-4","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fbriandoconnor%2Fdockstore-tool-bamstats/versions/1.25-4","verified":false,"verified-source":""},{"descriptor-type":[],"dockerfile":true,"id":"quay.io/briandoconnor/dockstore-tool-bamstats:1.25-5","image":"7c92a8e8e407933940e60f4fdc78733124b856e1445ab822db559950a8b3c2b1","meta-version":"2016-06-21 19:56:59.0","name":"1.25-5","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fbriandoconnor%2Fdockstore-tool-bamstats/versions/1.25-5","verified":false,"verified-source":""},{"descriptor-type":[],"dockerfile":true,"id":"quay.io/briandoconnor/dockstore-tool-bamstats:1.25-7","image":"cafa05020883d5ec6f16be1a58b5d4a4f49ab5ce8dbca433c5d05a3c24893677","meta-version":"2016-08-22 14:02:21.0","name":"1.25-7","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fbriandoconnor%2Fdockstore-tool-bamstats/versions/1.25-7","verified":false,"verified-source":""},{"descriptor-type":[],"dockerfile":true,"id":"quay.io/briandoconnor/dockstore-tool-bamstats:develop","image":"38b710d8db910522402d9b5c5525c983b48f48f59a66a9b1e183fb19fe077b8a","meta-version":"2018-08-31 19:21:18.0","name":"develop","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fbriandoconnor%2Fdockstore-tool-bamstats/versions/develop","verified":false,"verified-source":""},{"descriptor-type":[],"dockerfile":true,"id":"quay.io/briandoconnor/dockstore-tool-bamstats:latest","image":"2c63c09ac46d61c367c2097e908bcb4fe5cfdd57f5d9bfce8215133b23f1a2d8","meta-version":"2016-11-11 18:28:10.0","name":"latest","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fbriandoconnor%2Fdockstore-tool-bamstats/versions/latest","verified":false,"verified-source":""}]},{"author":"Brian O'Connor","contains":[],"description":"![build_status](https://quay.io/repository/briandoconnor/dockstore-tool-bamstats/status)\nA Docker container for the BAMStats command. See the [BAMStats](http://bamstats.sourceforge.net/) website for more information.","id":"quay.io/briandoconnor/dockstore-tool-bamstats-class","meta-version":"2018-03-16 18:17:22.117","organization":"briandoconnor","signed":false,"toolclass":{"description":"CommandLineTool","id":"0","name":"CommandLineTool"},"toolname":"dockstore-tool-bamstats-class","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fbriandoconnor%2Fdockstore-tool-bamstats-class","verified":false,"verified-source":"[]","versions":[{"descriptor-type":[],"dockerfile":true,"id":"quay.io/briandoconnor/dockstore-tool-bamstats-class:1.0","image":"dd396c8cb73599dfc8160aa12830e929fd898f7ecaed71420e15573dd705b1f6","meta-version":"2018-03-16 11:51:22.0","name":"1.0","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fbriandoconnor%2Fdockstore-tool-bamstats-class/versions/1.0","verified":false,"verified-source":""}]},{"author":"Unknown author","contains":[],"description":"","id":"registry.hub.docker.com/cancercollaboratory/dockstore-tool-bamstats","meta-version":"2017-03-24 19:39:31.691","organization":"cancercollaboratory","signed":false,"toolclass":{"description":"CommandLineTool","id":"0","name":"CommandLineTool"},"toolname":"dockstore-tool-bamstats","url":"https://dockstore.org/api/api/ga4gh/v1/tools/registry.hub.docker.com%2Fcancercollaboratory%2Fdockstore-tool-bamstats","verified":false,"verified-source":"[]","versions":[{"descriptor-type":[],"dockerfile":true,"id":"registry.hub.docker.com/cancercollaboratory/dockstore-tool-bamstats:develop","image":"","meta-version":"Thu Jan 01 00:00:00 UTC 1970","name":"develop","url":"https://dockstore.org/api/api/ga4gh/v1/tools/registry.hub.docker.com%2Fcancercollaboratory%2Fdockstore-tool-bamstats/versions/develop","verified":false,"verified-source":""}]},{"author":"Unknown author","contains":[],"description":"![build_status](https://quay.io/repository/ctb/dockstore-tool-bamstats/status)\nA Docker container for the BAMStats command. See the [BAMStats](http://bamstats.sourceforge.net/) website for more information.","id":"quay.io/ctb/dockstore-tool-bamstats","meta-version":"2017-07-09 13:34:56.24","organization":"ctb","signed":false,"toolclass":{"description":"CommandLineTool","id":"0","name":"CommandLineTool"},"toolname":"dockstore-tool-bamstats","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fctb%2Fdockstore-tool-bamstats","verified":false,"verified-source":"[]","versions":[{"descriptor-type":[],"dockerfile":true,"id":"quay.io/ctb/dockstore-tool-bamstats:develop","image":"b567cdecfc03b9d0f834f89f818abbcf0e9f41ec15c3e495611734b051b8ca46","meta-version":"2017-07-08 13:32:15.0","name":"develop","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fctb%2Fdockstore-tool-bamstats/versions/develop","verified":false,"verified-source":""},{"descriptor-type":[],"dockerfile":true,"id":"quay.io/ctb/dockstore-tool-bamstats:latest","image":"b567cdecfc03b9d0f834f89f818abbcf0e9f41ec15c3e495611734b051b8ca46","meta-version":"2017-07-08 13:32:41.0","name":"latest","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fctb%2Fdockstore-tool-bamstats/versions/latest","verified":false,"verified-source":""}]},{"author":"Brian O'Connor","contains":[],"description":"![build_status](https://quay.io/repository/collaboratory/dockstore-tool-bamstats/status)\nA Docker container for the BAMStats command. See the [BAMStats](http://bamstats.sourceforge.net/) website for more information.\n","id":"quay.io/collaboratory/dockstore-tool-bamstats","meta-version":"2018-09-13 16:01:06.861","organization":"collaboratory","signed":false,"toolclass":{"description":"CommandLineTool","id":"0","name":"CommandLineTool"},"toolname":"dockstore-tool-bamstats","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fcollaboratory%2Fdockstore-tool-bamstats","verified":false,"verified-source":"[]","versions":[{"descriptor-type":[],"dockerfile":true,"id":"quay.io/collaboratory/dockstore-tool-bamstats:1.25","image":"074f5841041dc6cf72c79a0c451329dbfdbe52fe8fdbe5da27fee9ed000118f9","meta-version":"2017-06-28 19:19:25.0","name":"1.25","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fcollaboratory%2Fdockstore-tool-bamstats/versions/1.25","verified":false,"verified-source":""},{"descriptor-type":[],"dockerfile":true,"id":"quay.io/collaboratory/dockstore-tool-bamstats:1.25-3","image":"05deb492f7902cd9b3c4967ec7d13a217bc94704b0e1c539e510b063e46b73e7","meta-version":"2017-06-28 19:33:44.0","name":"1.25-3","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fcollaboratory%2Fdockstore-tool-bamstats/versions/1.25-3","verified":false,"verified-source":""},{"descriptor-type":[],"dockerfile":true,"id":"quay.io/collaboratory/dockstore-tool-bamstats:1.25-5","image":"8bec4a43e8511f180bd56e7ec9e409166300bbd3516ee5762911cc547cc2006e","meta-version":"2017-06-28 19:29:16.0","name":"1.25-5","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fcollaboratory%2Fdockstore-tool-bamstats/versions/1.25-5","verified":false,"verified-source":""},{"descriptor-type":[],"dockerfile":true,"id":"quay.io/collaboratory/dockstore-tool-bamstats:1.25-6","image":"ffafce0cef14290b1cffbe293482e482a912bcc35668e6e6f0824ac8c07f3a4c","meta-version":"2017-06-28 19:25:56.0","name":"1.25-6","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fcollaboratory%2Fdockstore-tool-bamstats/versions/1.25-6","verified":false,"verified-source":""},{"descriptor-type":[],"dockerfile":true,"id":"quay.io/collaboratory/dockstore-tool-bamstats:1.25-6_1.0","image":"002fb001123d23f3e128dfb87af044a22f762d349e62f327b1f103c5b0232e11","meta-version":"2017-06-28 19:22:46.0","name":"1.25-6_1.0","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fcollaboratory%2Fdockstore-tool-bamstats/versions/1.25-6_1.0","verified":false,"verified-source":""},{"descriptor-type":[],"dockerfile":true,"id":"quay.io/collaboratory/dockstore-tool-bamstats:1.25-7","image":"9ad0ddfbcc584e3e117a412105219e0710affb2027074a519ec8ed6a6c031fe4","meta-version":"2018-08-31 19:37:43.0","name":"1.25-7","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fcollaboratory%2Fdockstore-tool-bamstats/versions/1.25-7","verified":false,"verified-source":""},{"descriptor-type":[],"dockerfile":true,"id":"quay.io/collaboratory/dockstore-tool-bamstats:develop","image":"8ff9ae0d3e29a4501bc46600730f8e5300ce93e94768a091e36866dfbec29365","meta-version":"2018-08-31 19:35:45.0","name":"develop","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fcollaboratory%2Fdockstore-tool-bamstats/versions/develop","verified":false,"verified-source":""},{"descriptor-type":[],"dockerfile":true,"id":"quay.io/collaboratory/dockstore-tool-bamstats:latest","image":"9ad82a5ae0cf8b25f444fe6c3a2ad677153e968bbc73381b01936dd245c5d1a4","meta-version":"2017-06-28 19:44:24.0","name":"latest","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fcollaboratory%2Fdockstore-tool-bamstats/versions/latest","verified":false,"verified-source":""},{"descriptor-type":[],"dockerfile":true,"id":"quay.io/collaboratory/dockstore-tool-bamstats:master","image":"bd2ca7ee58ebdf2bd3bb5e2236dfd45719ec18d6456ea2c62f53b137253e2f2b","meta-version":"2017-06-28 19:48:25.0","name":"master","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fcollaboratory%2Fdockstore-tool-bamstats/versions/master","verified":false,"verified-source":""},{"descriptor-type":[],"dockerfile":true,"id":"quay.io/collaboratory/dockstore-tool-bamstats:test","image":"670cbae48afe7229b462ff57b5662b6ee62ced7d6ccd16be5908424323ae7b5d","meta-version":"2018-04-06 14:57:24.0","name":"test","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fcollaboratory%2Fdockstore-tool-bamstats/versions/test","verified":false,"verified-source":""}]},{"author":"Unknown author","contains":[],"description":"![build_status](https://quay.io/repository/collaboratory/dockstore-tool-bamstats/status)\nA Docker container for the BAMStats command. See the [BAMStats](http://bamstats.sourceforge.net/) website for more information.","id":"quay.io/k-cao/dockstore-tool-bamstats","meta-version":"2017-04-24 20:35:04.473","organization":"k-cao","signed":false,"toolclass":{"description":"CommandLineTool","id":"0","name":"CommandLineTool"},"toolname":"dockstore-tool-bamstats","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fk-cao%2Fdockstore-tool-bamstats","verified":false,"verified-source":"[]","versions":[{"descriptor-type":[],"dockerfile":true,"id":"quay.io/k-cao/dockstore-tool-bamstats:experiment","image":"37d2725df997f7bd342e185e98379c5a5f72d74500ea19c517ebe0077d508c80","meta-version":"2017-03-20 14:58:10.0","name":"experiment","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fk-cao%2Fdockstore-tool-bamstats/versions/experiment","verified":false,"verified-source":""},{"descriptor-type":[],"dockerfile":true,"id":"quay.io/k-cao/dockstore-tool-bamstats:master","image":"3f6e428b31f96ba4761fa25a40ba59bb2903052ecc19a687aad9547daff7af39","meta-version":"2017-03-20 15:52:55.0","name":"master","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fk-cao%2Fdockstore-tool-bamstats/versions/master","verified":false,"verified-source":""}]},{"author":"Brian O'Connor","contains":[],"description":"![build_status](https://quay.io/repository/collaboratory/dockstore-tool-bamstats/status)\nA Docker container for the BAMStats command. See the [BAMStats](http://bamstats.sourceforge.net/) website for more information.","id":"registry.hub.docker.com/nathankw/dockstore-tool-bamstats","meta-version":"2017-07-12 18:40:49.876","organization":"nathankw","signed":false,"toolclass":{"description":"CommandLineTool","id":"0","name":"CommandLineTool"},"toolname":"dockstore-tool-bamstats","url":"https://dockstore.org/api/api/ga4gh/v1/tools/registry.hub.docker.com%2Fnathankw%2Fdockstore-tool-bamstats","verified":false,"verified-source":"[]","versions":[{"descriptor-type":[],"dockerfile":true,"id":"registry.hub.docker.com/nathankw/dockstore-tool-bamstats:develop","image":"","meta-version":"Thu Jan 01 00:00:00 UTC 1970","name":"develop","url":"https://dockstore.org/api/api/ga4gh/v1/tools/registry.hub.docker.com%2Fnathankw%2Fdockstore-tool-bamstats/versions/develop","verified":false,"verified-source":""}]},{"author":"Unknown author","contains":[],"description":"","id":"quay.io/pvanheus/dockstore-tool-bamstats","meta-version":"2018-04-20 18:38:33.269","organization":"pvanheus","signed":false,"toolclass":{"description":"CommandLineTool","id":"0","name":"CommandLineTool"},"toolname":"dockstore-tool-bamstats","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fpvanheus%2Fdockstore-tool-bamstats","verified":false,"verified-source":"[]","versions":[{"descriptor-type":[],"dockerfile":true,"id":"quay.io/pvanheus/dockstore-tool-bamstats:1.25-3","image":"68224549eb0a3c28e50d53ef35dc97a2cb07573e6c81d6f594204c26985e2210","meta-version":"2017-05-02 18:50:19.0","name":"1.25-3","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fpvanheus%2Fdockstore-tool-bamstats/versions/1.25-3","verified":false,"verified-source":""}]},{"author":"Unknown author","contains":[],"description":"","id":"quay.io/superjw/dockstore-tool-bamstats","meta-version":"2018-11-26 15:21:36.474","organization":"superjw","signed":false,"toolclass":{"description":"CommandLineTool","id":"0","name":"CommandLineTool"},"toolname":"dockstore-tool-bamstats","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fsuperjw%2Fdockstore-tool-bamstats","verified":false,"verified-source":"[]","versions":[{"descriptor-type":[],"dockerfile":true,"id":"quay.io/superjw/dockstore-tool-bamstats:1.25-6_1.1","image":"cd303d1fd80a5e921445238852d01a8b2d5142beb688b6155fdde966fa712424","meta-version":"2018-11-26 11:49:36.0","name":"1.25-6_1.1","url":"https://dockstore.org/api/api/ga4gh/v1/tools/quay.io%2Fsuperjw%2Fdockstore-tool-bamstats/versions/1.25-6_1.1","verified":false,"verified-source":""}]}]

The output of that previous command is json format. Let's convert that json file into a readable table format using the python pandas.

In [ ]:
import pandas as pd
In [ ]:
df = pd.read_json(r'/content/test_bamstats_from_ga4gh_api.json')
In [5]:
df
Out[5]:
author contains description id meta-version organization signed toolclass toolname url verified verified-source versions
0 Andrew Duncan [] ![build_status](https://quay.io/repository/col... quay.io/briandoconnor/dockstore-tool-bamstats 2018-03-16 18:17:22.117 briandoconnor False {'description': 'CommandLineTool', 'id': '0', ... dockstore-tool-bamstats https://dockstore.org/api/api/ga4gh/v1/tools/q... False [] [{'descriptor-type': [], 'dockerfile': True, '...
1 Brian O'Connor [] ![build_status](https://quay.io/repository/bri... quay.io/briandoconnor/dockstore-tool-bamstats-... 2018-03-16 18:17:22.117 briandoconnor False {'description': 'CommandLineTool', 'id': '0', ... dockstore-tool-bamstats-class https://dockstore.org/api/api/ga4gh/v1/tools/q... False [] [{'descriptor-type': [], 'dockerfile': True, '...
2 Unknown author [] registry.hub.docker.com/cancercollaboratory/do... 2017-03-24 19:39:31.691 cancercollaboratory False {'description': 'CommandLineTool', 'id': '0', ... dockstore-tool-bamstats https://dockstore.org/api/api/ga4gh/v1/tools/r... False [] [{'descriptor-type': [], 'dockerfile': True, '...
3 Unknown author [] ![build_status](https://quay.io/repository/ctb... quay.io/ctb/dockstore-tool-bamstats 2017-07-09 13:34:56.24 ctb False {'description': 'CommandLineTool', 'id': '0', ... dockstore-tool-bamstats https://dockstore.org/api/api/ga4gh/v1/tools/q... False [] [{'descriptor-type': [], 'dockerfile': True, '...
4 Brian O'Connor [] ![build_status](https://quay.io/repository/col... quay.io/collaboratory/dockstore-tool-bamstats 2018-09-13 16:01:06.861 collaboratory False {'description': 'CommandLineTool', 'id': '0', ... dockstore-tool-bamstats https://dockstore.org/api/api/ga4gh/v1/tools/q... False [] [{'descriptor-type': [], 'dockerfile': True, '...
5 Unknown author [] ![build_status](https://quay.io/repository/col... quay.io/k-cao/dockstore-tool-bamstats 2017-04-24 20:35:04.473 k-cao False {'description': 'CommandLineTool', 'id': '0', ... dockstore-tool-bamstats https://dockstore.org/api/api/ga4gh/v1/tools/q... False [] [{'descriptor-type': [], 'dockerfile': True, '...
6 Brian O'Connor [] ![build_status](https://quay.io/repository/col... registry.hub.docker.com/nathankw/dockstore-too... 2017-07-12 18:40:49.876 nathankw False {'description': 'CommandLineTool', 'id': '0', ... dockstore-tool-bamstats https://dockstore.org/api/api/ga4gh/v1/tools/r... False [] [{'descriptor-type': [], 'dockerfile': True, '...
7 Unknown author [] quay.io/pvanheus/dockstore-tool-bamstats 2018-04-20 18:38:33.269 pvanheus False {'description': 'CommandLineTool', 'id': '0', ... dockstore-tool-bamstats https://dockstore.org/api/api/ga4gh/v1/tools/q... False [] [{'descriptor-type': [], 'dockerfile': True, '...
8 Unknown author [] quay.io/superjw/dockstore-tool-bamstats 2018-11-26 15:21:36.474 superjw False {'description': 'CommandLineTool', 'id': '0', ... dockstore-tool-bamstats https://dockstore.org/api/api/ga4gh/v1/tools/q... False [] [{'descriptor-type': [], 'dockerfile': True, '...