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..
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Makefile.read_aligner_training
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README.rst
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assemble-and-track.py
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assemble-on-the-go.py
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assembly-diff-2.py
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assembly-diff.py
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assemstats3.py
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bloom-count.py
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build-sparse-graph.py
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calc-best-assembly.py
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calc-error-profile.py
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calc-median-distribution.py
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collect-reads.py
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collect-variants.py
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correct-reads.py
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count-kmers-single.py
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count-kmers.py
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error-correct-pass2.py
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estimate_optimal_hash.py
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extract-compact-dbg.py
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extract-single-partition.py
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extract-unassembled-reads-2.py
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extract-unassembled-reads.py
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filter-below-abund.py
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filter-median-and-pct.py
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filter-median.py
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graph-size.py
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link-compact-dbg.py
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make-coverage.py
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memusg
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multi-rename.py
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normalize-by-median-pct.py
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optimal_args_hashbits.py
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print-stoptags.py
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print-tagset.py
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readaligner_pairhmm_train.py
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reassemble-contigs.py
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renumber-partitions.py
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saturate-by-median.py
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shuffle-reverse-rotary.py
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slice-reads-by-coverage.py
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split-fasta.py
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split-sequences-by-length.py
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stoptag-abundance-hist.py
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stoptags-by-position.py
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streaming-assembly-simple.py
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strip-partition.py
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subset-report.py
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sweep-files.py
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sweep-out-reads-with-contigs.py
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sweep-reads.py
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sweep-reads2.py
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sweep-reads3.py
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write-trimmomatic.py
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