Genotype to phenotpye mapping tutorials using LIMIX

We here provide tutorials for common tasks in genotype to phenotye analysis, ranging from raw data processing to complex genetic analyses.

Table of Contents

  1. Preprocessing and Quality control
  2. Linear regression and false discovery rates
  3. Linear mixed models and population structure
  4. Multiple trait analyses
  5. eQTL mapping and variance decomposition in yeast
  6. Multi-trait set test (mtSet)
  7. Interaction set test (iSet)