Doing reproducible research
Welcome to the Reproducible Imaging Tutorial! It covers various concepts enabling reproducible research. We recommend that you start with the introductory section to familiarize yourself with core tools and then move on to more advanced concepts. The notebooks will use a combination of Python and Shell commands to introduce you to various tools.
All of the notebooks used in this tutorial can be found on https://github.com/satra/reproducible-imaging.
For the tutorial, we will use a Docker container. You need to install a Docker and download a docker image that provides you an environment.
Introductory
This section is meant as an introduction to core elements of reproducible research.
Intermediate and advanced notebooks forthcoming
If you would like to help, join the discussion here .
External Resources
This section will give you helpful links and resources, so that you always know where to go to learn more.