ref: https://github.com/conda-forge/openmpi-feedstock/pull/142
Given two conda-forge build logs, compare them after normalization of random elements like timestamps, paths.
Also extract conda installs, as the most likely source
First, download log files (this won't work after log retention expires)
from pathlib import Path
import requests
urls = {
"bad": "https://dev.azure.com/conda-forge/84710dde-1620-425b-80d0-4cf5baca359d/_apis/build/builds/866388/logs/79",
"good": "https://dev.azure.com/conda-forge/84710dde-1620-425b-80d0-4cf5baca359d/_apis/build/builds/866253/logs/39",
}
logs_dir = Path("logs")
logs_dir.mkdir(exist_ok=True)
log_paths = []
for name, url in urls.items():
p = logs_dir / f"{name}.txt"
log_paths.append(p)
if not p.exists():
print(f"Downloading {url} to {p}")
r = requests.get(url)
r.raise_for_status()
with p.open("w") as f:
f.write(r.text)
Normalize path prefixes, strip timestamps, discard docker pull progress
# normalize path prefixes, strip timestamps
import re
prefix_pattern = re.compile(r"/home/conda/feedstock_root/build_artifacts/([^/]+)/")
placehold_pattern = re.compile(r"_placehold[placehold_]+")
docker_pattern = re.compile(r"^[a-f0-9]{12}: ")
def process_line(line):
if not line:
return ""
_ts, line = line.split(" ", 1)
if docker_pattern.match(line):
return ""
line, _ = prefix_pattern.subn("$BUILD_DIR/", line)
line, _ = placehold_pattern.subn("", line)
return line
for log_path in log_paths:
with log_path.open() as f_in, log_path.with_suffix(".strip.txt").open("w") as f_out:
for line in f_in:
line = process_line(line)
f_out.write(line)
Extract each conda-install plan into a separate file
import shutil
from enum import Enum
class State:
skipping = 1
consuming = 2
chunk_bounds = {
"Package Plan": re.compile("Preparing transaction"),
"conda list": re.compile(r"^\+"),
}
def env_chunks(path):
"""Yield strings, each representing a single conda install"""
chunk_lines = []
state = State.skipping
current_chunk_end = None
with open(path) as f:
for line in f:
if not line:
continue
line = process_line(line)
for chunk_start, chunk_end in chunk_bounds.items():
if chunk_start in line:
chunk_lines = []
state = State.consuming
current_chunk_end = chunk_end
break
if chunk_lines and current_chunk_end.search(line):
yield ''.join(chunk_lines)
chunk_lines = []
state = State.skipping
if state == State.consuming:
chunk_lines.append(line)
for path in log_paths:
env_dir = path.with_suffix(".envs")
shutil.rmtree(env_dir)
env_dir.mkdir(exist_ok=True)
for i, chunk in enumerate(env_chunks(path)):
env_path = env_dir / f"env.{i:02}.txt"
with env_path.open("w") as f:
f.write(chunk)
!cat logs/good.envs/env.01.txt
## Package Plan ## environment location: $BUILD_DIR/_h_env The following NEW packages will be INSTALLED: _libgcc_mutex: 0.1-conda_forge conda-forge _openmp_mutex: 4.5-2_gnu conda-forge ca-certificates: 2023.11.17-hbcca054_0 conda-forge cuda-version: 11.8-h70ddcb2_2 conda-forge icu: 73.2-h59595ed_0 conda-forge libevent: 2.1.12-hf998b51_1 conda-forge libgcc-ng: 13.2.0-h807b86a_4 conda-forge libgfortran-ng: 13.2.0-h69a702a_4 conda-forge libgfortran5: 13.2.0-ha4646dd_4 conda-forge libgomp: 13.2.0-h807b86a_4 conda-forge libhwloc: 2.9.3-default_h554bfaf_1009 conda-forge libiconv: 1.17-hd590300_2 conda-forge libnl: 3.9.0-hd590300_0 conda-forge libnuma: 2.0.16-h0b41bf4_1 conda-forge libstdcxx-ng: 13.2.0-h7e041cc_4 conda-forge libxml2: 2.12.4-h232c23b_1 conda-forge libzlib: 1.2.13-hd590300_5 conda-forge openssl: 3.2.0-hd590300_1 conda-forge rdma-core: 49.0-hd3aeb46_2 conda-forge ucx: 1.15.0-h75e419f_3 conda-forge xz: 5.2.6-h166bdaf_0 conda-forge zlib: 1.2.13-hd590300_5 conda-forge
First, show the diffs of environment installations:
!diff --color=always -U 1 -r logs/bad.envs logs/good.envs
diff --color=always -U 1 -r logs/bad.envs/env.00.txt logs/good.envs/env.00.txt --- logs/bad.envs/env.00.txt 2024-02-08 13:19:39 +++ logs/good.envs/env.00.txt 2024-02-08 13:19:39 @@ -31,3 +31,3 @@ conda-index 0.3.0 pyhd8ed1ab_1 conda-forge -conda-libmamba-solver 24.1.0 pyhd8ed1ab_0 conda-forge +conda-libmamba-solver 23.12.0 pyhd8ed1ab_0 conda-forge conda-oci-mirror 0.1.0 pyhd8ed1ab_0 conda-forge @@ -103,3 +103,3 @@ openjpeg 2.5.0 h488ebb8_3 conda-forge -openssl 3.2.1 hd590300_0 conda-forge +openssl 3.2.0 hd590300_1 conda-forge oras-py 0.1.14 pyhd8ed1ab_0 conda-forge @@ -132,3 +132,3 @@ python_abi 3.10 4_cp310 conda-forge -pytz 2023.4 pyhd8ed1ab_0 conda-forge +pytz 2023.3.post1 pyhd8ed1ab_0 conda-forge pyyaml 6.0.1 py310h2372a71_1 conda-forge diff --color=always -U 1 -r logs/bad.envs/env.01.txt logs/good.envs/env.01.txt --- logs/bad.envs/env.01.txt 2024-02-08 13:19:39 +++ logs/good.envs/env.01.txt 2024-02-08 13:19:39 @@ -24,4 +24,4 @@ libzlib: 1.2.13-hd590300_5 conda-forge - openssl: 3.2.1-hd590300_0 conda-forge - rdma-core: 50.0-hd3aeb46_0 conda-forge + openssl: 3.2.0-hd590300_1 conda-forge + rdma-core: 49.0-hd3aeb46_2 conda-forge ucx: 1.15.0-h75e419f_3 conda-forge Only in logs/good.envs: env.03.txt Only in logs/good.envs: env.04.txt Only in logs/good.envs: env.05.txt Only in logs/good.envs: env.06.txt Only in logs/good.envs: env.07.txt Only in logs/good.envs: env.08.txt
Next, compare the full output to see if there's any useful info in there.
There are lots of small diffs, e.g. line ordering due to parallel builds.
!difft --context=0 --color=always --display=inline --background=light logs/bad.strip.txt logs/good.strip.txt | head -n 950
logs/good.strip.txt --- 1/96 --- Text 7 Help : https://docs.microsoft.com/azure/devops/pipelines/tasks/utility/command-line 8 ============================================================================== 9 Generating script. 10 ========================== Starting Command Output =========================== 11 [command]/usr/bin/bash --noprofile --norc /home/vsts/work/_temp/0659e5d0-8260-4039-a8f2-1d47540e1ab7.sh 11 [command]/usr/bin/bash --noprofile --norc /home/vsts/work/_temp/443374a8-1d70-4b67-8172-32de033aa4f2.sh 12 ##[group]Configure Docker logs/good.strip.txt --- 2/96 --- Text 21 ++ pwd 22 + FEEDSTOCK_ROOT=/home/vsts/work/1/s 23 + RECIPE_ROOT=/home/vsts/work/1/s/recipe 24 + '[' -z openmpi-feedstock ']' 25 + [[ efdc204c50e34b01b95170d54debd6d97def2d1f == '' ]] 25 + [[ 4c79b834036a42b03ded910ff57f8a39174c38d4 == '' ]] 26 + docker info logs/good.strip.txt --- 3/96 --- Text 67 apparmor 68 seccomp 69 Profile: builtin 70 cgroupns 71 Kernel Version: 6.2.0-1019-azure 71 Kernel Version: 6.2.0-1018-azure 72 Operating System: Ubuntu 22.04.3 LTS logs/good.strip.txt --- 4/96 --- Text 73 OSType: linux 74 Architecture: x86_64 75 CPUs: 2 76 Total Memory: 6.76GiB 77 Name: fv-az367-699 78 ID: 8abab386-ee6f-4a46-817c-c1639873e713 77 Name: fv-az710-393 78 ID: 9368eea6-35a7-407f-8893-7ddd489a1d43 79 Docker Root Dir: /var/lib/docker logs/good.strip.txt --- 5/96 --- Text 99 ##[endgroup] 100 ##[group]Start Docker 101 + export UPLOAD_PACKAGES=True 102 + UPLOAD_PACKAGES=True 103 + export IS_PR_BUILD=False 104 + IS_PR_BUILD=False 107 Digest: sha256:bf7e33e813d46e90df4b29951c319445914194b690682a824f3ade9069b3091a 103 + export IS_PR_BUILD=True 104 + IS_PR_BUILD=True 107 Digest: sha256:a5608bacabedd8a77d269e2a8445875ad59e072275691982fb05a9ebb363edd1 108 Status: Downloaded newer image for quay.io/condaforge/linux-anvil-cuda:11.8 logs/good.strip.txt --- 6/96 --- Text 150 ++ [[ azure == \d\r\o\n\e ]] 151 ++ [[ azure == \g\i\t\h\u\b\_\a\c\t\i\o\n\s ]] 152 ++ export CPU_COUNT=2 153 ++ CPU_COUNT=2 155 +++ cat /home/conda/feedstock_root/conda-forge.yml 154 +++ cat /home/conda/feedstock_root/conda-forge.yml 156 ++ conda config --env --set channel_priority strict logs/good.strip.txt --- 7/96 --- Text 216 ++ echo 'export CONDA_BLD_PATH='\''/home/conda/feedstock_root/build_artifacts'\''' 217 ++ '[' -n 2 ']' 218 ++ echo 'export CPU_COUNT='\''2'\''' 219 ++ echo 'export PYTHONUNBUFFERED='\''1'\''' 221 +++ cat /home/conda/feedstock_root/.ci_support/linux_64_c_compiler_version11cuda_compilernvcccuda_compiler_version11.8cxx_compiler_version11fortran_compiler_version11mpi_typeconda.yaml 220 +++ cat /home/conda/feedstock_root/.ci_support/linux_64_c_compiler_version11cuda_compilernvcccuda_compiler_version11.8cxx_compiler_version11fortran_compiler_version11mpi_typeconda.yaml 222 ++ CUDA_VERSION=11.8 logs/good.strip.txt --- 8/96 --- Text 232 ++++ conda info --json 233 ++++ jq -r .platform 234 +++ BUILD_PLATFORM=linux-64 235 +++ '[' -f /home/conda/feedstock_root/.ci_support/linux_64_c_compiler_version11cuda_compilernvcccuda_compiler_version11.8cxx_compiler_version11fortran_compiler_version11mpi_typeconda.yaml ']' 237 ++++ shyaml get-value target_platform.0 linux-64 240 ++++ shyaml get-value cuda_compiler_version.0 None 243 ++++ shyaml get-value cdt_name.0 cos6 236 ++++ shyaml get-value target_platform.0 linux-64 239 ++++ shyaml get-value cuda_compiler_version.0 None 242 ++++ shyaml get-value cdt_name.0 cos6 244 +++ CDT_NAME=cos7 logs/good.strip.txt --- 9/96 --- Text 246 +++ CUDA_COMPILER_VERSION=11.8 247 +++ CDT_NAME=cos7 248 +++ [[ linux-64 != \l\i\n\u\x\-\6\4 ]] 249 ++ '[' -f /home/conda/feedstock_root/.ci_support/linux_64_c_compiler_version11cuda_compilernvcccuda_compiler_version11.8cxx_compiler_version11fortran_compiler_version11mpi_typeconda.yaml ']' 251 +++ shyaml get-value MACOSX_DEPLOYMENT_TARGET.0 0 250 +++ shyaml get-value MACOSX_DEPLOYMENT_TARGET.0 0 252 ++ need_osx_sdk=0 logs/good.strip.txt --- 10/96 --- Text 278 /opt/conda/pkgs 279 envs directories : /opt/conda/envs 280 /home/conda/.conda/envs 281 platform : linux-64 282 user-agent : conda/23.11.0 requests/2.31.0 CPython/3.10.13 Linux/6.2.0-1019-azure centos/7.9.2009 glibc/2.17 solver/libmamba conda-libmamba-solver/24.1.0 libmambapy/1.5.6 282 user-agent : conda/23.11.0 requests/2.31.0 CPython/3.10.13 Linux/6.2.0-1018-azure centos/7.9.2009 glibc/2.17 solver/libmamba conda-libmamba-solver/23.12.0 libmambapy/1.5.6 283 UID:GID : 1001:1001 logs/good.strip.txt --- 11/96 --- Text 341 conda-env 2.6.0 1 conda-forge 342 conda-forge-ci-setup 4.3.1 py310h7a2d8a0_100 conda-forge 343 conda-forge-metadata 0.6.2 pyhd8ed1ab_0 conda-forge 344 conda-index 0.3.0 pyhd8ed1ab_1 conda-forge 345 conda-libmamba-solver 24.1.0 pyhd8ed1ab_0 conda-forge 345 conda-libmamba-solver 23.12.0 pyhd8ed1ab_0 conda-forge 346 conda-oci-mirror 0.1.0 pyhd8ed1ab_0 conda-forge logs/good.strip.txt --- 12/96 --- Text 413 nbformat 5.9.2 pyhd8ed1ab_0 conda-forge 414 ncurses 6.4 h59595ed_2 conda-forge 415 oniguruma 6.9.9 hd590300_0 conda-forge 416 openjpeg 2.5.0 h488ebb8_3 conda-forge 417 openssl 3.2.1 hd590300_0 conda-forge 417 openssl 3.2.0 hd590300_1 conda-forge 418 oras-py 0.1.14 pyhd8ed1ab_0 conda-forge logs/good.strip.txt --- 13/96 --- Text 442 python-dateutil 2.8.2 pyhd8ed1ab_0 conda-forge 443 python-fastjsonschema 2.19.1 pyhd8ed1ab_0 conda-forge 444 python-libarchive-c 5.0 py310hff52083_2 conda-forge 445 python_abi 3.10 4_cp310 conda-forge 446 pytz 2023.4 pyhd8ed1ab_0 conda-forge 446 pytz 2023.3.post1 pyhd8ed1ab_0 conda-forge 447 pyyaml 6.0.1 py310h2372a71_1 conda-forge logs/good.strip.txt --- 14/96 --- Text 486 zipp 3.17.0 pyhd8ed1ab_0 conda-forge 487 zstandard 0.22.0 py310h1275a96_0 conda-forge 488 zstd 1.5.5 hfc55251_0 conda-forge 489 + make_build_number /home/conda/feedstock_root /home/conda/recipe_root /home/conda/feedstock_root/.ci_support/linux_64_c_compiler_version11cuda_compilernvcccuda_compiler_version11.8cxx_compiler_version11fortran_compiler_version11mpi_typeconda.yaml 491 + [[ linux-64 != \l\i\n\u\x\-\6\4 ]] 495 + conda mambabuild /home/conda/recipe_root -m /home/conda/feedstock_root/.ci_support/linux_64_c_compiler_version11cuda_compilernvcccuda_compiler_version11.8cxx_compiler_version11fortran_compiler_version11mpi_typeconda.yaml --suppress-variables --clobber-file /home/conda/feedstock_root/.ci_support/clobber_linux_64_c_compiler_version11cuda_compilernvcccuda_compiler_version11.8cxx_compiler_version11fortran_compiler_version11mpi_typeconda.yaml --extra-meta flow_run_id=azure_20240129.2.4 remote_url=https://github.com/conda-forge/openmpi-feedstock sha=efdc204c50e34b01b95170d54debd6d97def2d1f 490 + [[ linux-64 != \l\i\n\u\x\-\6\4 ]] 495 + conda mambabuild /home/conda/recipe_root -m /home/conda/feedstock_root/.ci_support/linux_64_c_compiler_version11cuda_compilernvcccuda_compiler_version11.8cxx_compiler_version11fortran_compiler_version11mpi_typeconda.yaml --suppress-variables --clobber-file /home/conda/feedstock_root/.ci_support/clobber_linux_64_c_compiler_version11cuda_compilernvcccuda_compiler_version11.8cxx_compiler_version11fortran_compiler_version11mpi_typeconda.yaml --extra-meta flow_run_id=azure_20240129.1.1 remote_url=*** sha=4c79b834036a42b03ded910ff57f8a39174c38d4 496 Updating build index: /home/conda/feedstock_root/build_artifacts logs/good.strip.txt --- 15/96 --- Text 562 libnuma: 2.0.16-h0b41bf4_1 conda-forge 563 libstdcxx-ng: 13.2.0-h7e041cc_4 conda-forge 564 libxml2: 2.12.4-h232c23b_1 conda-forge 565 libzlib: 1.2.13-hd590300_5 conda-forge 566 openssl: 3.2.1-hd590300_0 conda-forge 567 rdma-core: 50.0-hd3aeb46_0 conda-forge 566 openssl: 3.2.0-hd590300_1 conda-forge 567 rdma-core: 49.0-hd3aeb46_2 conda-forge 568 ucx: 1.15.0-h75e419f_3 conda-forge logs/good.strip.txt --- 16/96 --- Text 756 checking if want dlopen support... yes 757 checking for default value of mca_base_component_show_load_errors... enabled for all 758 checking if want heterogeneous support... no 759 checking if want IPv6 support... no 760 checking if want package/brand string... Open MPI conda@0112a720bc5a Distribution 760 checking if want package/brand string... Open MPI conda@bfb2a6efbd18 Distribution 761 checking if want ident string... 5.0.1 logs/good.strip.txt --- 17/96 --- Text 1070 checking KIND value of Fortran C_LONG_LONG... (cached) 8 1071 checking if Fortran compiler supports INTEGER*16... yes 1072 checking size of Fortran INTEGER*16... 16 1073 checking for C type corresponding to INTEGER*16... not found 1075 checking for corresponding KIND value of INTEGER*16... 0 1074 checking for corresponding KIND value of INTEGER*16... 0 1076 checking KIND value of Fortran 0... 0 logs/good.strip.txt --- 18/96 --- Text 1598 checking for pmix standard stable ABI version(s)... 0.0 1599 checking for pmix standard provisional ABI version(s)... 0.0 1600 checking if want pmix maintainer support... disabled 1601 checking for pmix directory prefix... (none) 1602 checking if want package/brand string... PMIx conda@0112a720bc5a Distribution 1602 checking if want package/brand string... PMIx conda@bfb2a6efbd18 Distribution 1603 logs/good.strip.txt --- 19/96 --- Text 2508 checking directory of prefix... $BUILD_DIR/_h_env 2509 checking directory of source tree... . 2510 2511 *** Checking versions 2512 checking for repo version... 2024-02-01 2515 checking PMIx Reference Run-Time Environment repository version... 2024-02-01 2512 checking for repo version... 2024-01-29 2515 checking PMIx Reference Run-Time Environment repository version... 2024-01-29 2516 checking for bootstrap Autoconf version... 2.71 logs/good.strip.txt --- 20/96 --- Text 2549 checking if a proxy version string for prte is required... yes 2550 checking if a proxy package name for prte is required... yes 2551 checking if a proxy bugreport path for prte is required... yes 2552 checking if want IPv6 support... no 2553 checking if want package/brand string... Open MPI conda@0112a720bc5a Distribution 2553 checking if want package/brand string... Open MPI conda@bfb2a6efbd18 Distribution 2554 checking if want ident string... 3.0.3rc1 logs/good.strip.txt --- 21/96 --- Text 2864 checking if MCA component ess:alps can compile... no 2865 2866 --- MCA component ess:lsf (m4 configuration macro) 2867 checking for MCA component ess:lsf compile mode... dso 2868 checking for library containing yp_all... no 2869 configure: WARNING: Could not find yp_all. Please see https://github.com/openpmix/prrte/wiki/Building-LSF-support for more details. 2868 checking for library containing yp_all... configure: WARNING: Could not find yp_all. Please see https://github.com/openpmix/prrte/wiki/Building-LSF-support for more details. 2869 no 2870 checking for libevent conflict... No conflict found. -levent is not being explicitly used. logs/good.strip.txt --- 22/96 --- Text 3386 checking for prte.h... no 3387 ./configure: line 66913: test: -eq: unary operator expected 3388 3389 *** Fault tolerance 3390 checking if want fault tolerance... Enabled mpi (Specified auto) 3391 configure: WARNING: ************************************************** 3390 checking if want fault tolerance... configure: WARNING: ************************************************** 3391 configure: WARNING: *** Fault Tolerance Integration into Open MPI is * logs/good.strip.txt --- 23/96 --- Text 3393 configure: WARNING: *** compiled-in, but off by default. Use mpiexec * 3394 configure: WARNING: *** and MCA parameters to turn it on. * 3395 configure: WARNING: *** Not all components support fault tolerance. * 3396 configure: WARNING: ************************************************** 3396 Enabled mpi (Specified auto) 3397 checking if want checkpoint/restart enabled debugging option... Disabled logs/good.strip.txt --- 24/96 --- Text 5663 make[1]: Entering directory '$BUILD_DIR/work/contrib' 5664 make[1]: Nothing to be done for 'all'. 5665 make[1]: Leaving directory '$BUILD_DIR/work/contrib' 5666 Making all in 3rd-party 5667 make[1]: Entering directory '$BUILD_DIR/work/3rd-party' 5668 Makefile:1684: warning: overriding recipe for target 'check-recursive' logs/good.strip.txt --- 25/96 --- Text 5665 make[1]: Leaving directory '$BUILD_DIR/work/contrib' 5666 Making all in 3rd-party 5667 Makefile:1684: warning: overriding recipe for target 'check-recursive' 5668 Makefile:1406: warning: ignoring old recipe for target 'check-recursive' 5669 make[1]: Entering directory '$BUILD_DIR/work/3rd-party' 5670 Making all in openpmix logs/good.strip.txt --- 26/96 --- Text 5745 CCLD libpmix_util.la 5746 make[4]: Leaving directory '$BUILD_DIR/work/3rd-party/openpmix/src/util' 5747 Making all in mca/base 5748 make[4]: Entering directory '$BUILD_DIR/work/3rd-party/openpmix/src/mca/base' 5750 CC pmix_mca_base_component_compare.lo 5749 CC pmix_mca_base_component_compare.lo 5751 CC pmix_mca_base_component_find.lo logs/good.strip.txt --- 27/96 --- Text 5857 CCLD libmca_preg.la 5858 make[4]: Leaving directory '$BUILD_DIR/work/3rd-party/openpmix/src/mca/preg' 5859 Making all in mca/prm 5860 make[4]: Entering directory '$BUILD_DIR/work/3rd-party/openpmix/src/mca/prm' 5862 CC base/prm_base_select.lo 5861 CC base/prm_base_select.lo 5863 CC base/prm_base_stubs.lo logs/good.strip.txt --- 28/96 --- Text 6004 CCLD pmix_mca_bfrops_v20.la 6005 make[4]: Leaving directory '$BUILD_DIR/work/3rd-party/openpmix/src/mca/bfrops/v20' 6006 Making all in mca/bfrops/v21 6007 make[4]: Entering directory '$BUILD_DIR/work/3rd-party/openpmix/src/mca/bfrops/v21' 6009 CC bfrop_pmix21.lo 6008 CC bfrop_pmix21.lo 6010 CCLD pmix_mca_bfrops_v21.la logs/good.strip.txt --- 29/96 --- Text 6022 CCLD pmix_mca_bfrops_v4.la 6023 make[4]: Leaving directory '$BUILD_DIR/work/3rd-party/openpmix/src/mca/bfrops/v4' 6024 Making all in mca/bfrops/v41 6025 make[4]: Entering directory '$BUILD_DIR/work/3rd-party/openpmix/src/mca/bfrops/v41' 6027 CC bfrop_pmix41_component.lo 6026 CC bfrop_pmix41_component.lo 6028 CCLD pmix_mca_bfrops_v41.la logs/good.strip.txt --- 30/96 --- Text 6110 CCLD pmix_mca_preg_compress.la 6111 make[4]: Leaving directory '$BUILD_DIR/work/3rd-party/openpmix/src/mca/preg/compress' 6112 Making all in mca/preg/native 6113 make[4]: Entering directory '$BUILD_DIR/work/3rd-party/openpmix/src/mca/preg/native' 6115 CC preg_native_component.lo 6114 CC preg_native_component.lo 6116 CCLD pmix_mca_preg_native.la logs/good.strip.txt --- 31/96 --- Text 6146 CCLD pmix_mca_psec_none.la 6147 make[4]: Leaving directory '$BUILD_DIR/work/3rd-party/openpmix/src/mca/psec/none' 6148 Making all in mca/psensor/file 6149 make[4]: Entering directory '$BUILD_DIR/work/3rd-party/openpmix/src/mca/psensor/file' 6151 CC psensor_file.lo 6150 CC psensor_file.lo 6152 CCLD pmix_mca_psensor_file.la logs/good.strip.txt --- 32/96 --- Text 6152 CCLD pmix_mca_psensor_file.la 6153 make[4]: Leaving directory '$BUILD_DIR/work/3rd-party/openpmix/src/mca/psensor/file' 6154 Making all in mca/psensor/heartbeat 6155 make[4]: Entering directory '$BUILD_DIR/work/3rd-party/openpmix/src/mca/psensor/heartbeat' 6157 CC psensor_heartbeat.lo 6156 CC psensor_heartbeat.lo 6158 CCLD pmix_mca_psensor_heartbeat.la logs/good.strip.txt --- 33/96 --- Text 6164 CCLD pmix_mca_pshmem_mmap.la 6165 make[4]: Leaving directory '$BUILD_DIR/work/3rd-party/openpmix/src/mca/pshmem/mmap' 6166 Making all in mca/psquash/flex128 6167 make[4]: Entering directory '$BUILD_DIR/work/3rd-party/openpmix/src/mca/psquash/flex128' 6169 CC psquash_flex128.lo 6168 CC psquash_flex128.lo 6170 CCLD pmix_mca_psquash_flex128.la logs/good.strip.txt --- 34/96 --- Text 6572 CCLD prte_mca_errmgr_prted.la 6573 make[4]: Leaving directory '$BUILD_DIR/work/3rd-party/prrte/src/mca/errmgr/prted' 6574 Making all in mca/ess/env 6575 make[4]: Entering directory '$BUILD_DIR/work/3rd-party/prrte/src/mca/ess/env' 6577 CC ess_env_component.lo 6576 CC ess_env_component.lo 6578 CCLD prte_mca_ess_env.la logs/good.strip.txt --- 35/96 --- Text 6664 CCLD prte_mca_prtereachable_weighted.la 6665 make[4]: Leaving directory '$BUILD_DIR/work/3rd-party/prrte/src/mca/prtereachable/weighted' 6666 Making all in mca/prtereachable/netlink 6667 make[4]: Entering directory '$BUILD_DIR/work/3rd-party/prrte/src/mca/prtereachable/netlink' 6669 CC reachable_netlink_module.lo 6668 CC reachable_netlink_module.lo 6670 CC reachable_netlink_utils_common.lo logs/good.strip.txt --- 36/96 --- Text 6683 CCLD prte_mca_ras_testrm.la 6684 make[4]: Leaving directory '$BUILD_DIR/work/3rd-party/prrte/src/mca/ras/testrm' 6685 Making all in mca/ras/gridengine 6686 make[4]: Entering directory '$BUILD_DIR/work/3rd-party/prrte/src/mca/ras/gridengine' 6688 CC ras_gridengine_component.lo 6687 CC ras_gridengine_component.lo 6689 CCLD prte_mca_ras_gridengine.la logs/good.strip.txt --- 37/96 --- Text 6701 CCLD prte_mca_ras_slurm.la 6702 make[4]: Leaving directory '$BUILD_DIR/work/3rd-party/prrte/src/mca/ras/slurm' 6703 Making all in mca/rmaps/ppr 6704 make[4]: Entering directory '$BUILD_DIR/work/3rd-party/prrte/src/mca/rmaps/ppr' 6706 CC rmaps_ppr.lo 6705 CC rmaps_ppr.lo 6707 CCLD prte_mca_rmaps_ppr.la logs/good.strip.txt --- 38/96 --- Text 6772 CCLD prte_mca_schizo_prte.la 6773 make[4]: Leaving directory '$BUILD_DIR/work/3rd-party/prrte/src/mca/schizo/prte' 6774 Making all in mca/state/dvm 6775 make[4]: Entering directory '$BUILD_DIR/work/3rd-party/prrte/src/mca/state/dvm' 6777 CC state_dvm.lo 6776 CC state_dvm.lo 6778 state_dvm.c: In function 'vm_ready': logs/good.strip.txt --- 39/96 --- Text 6782 CCLD prte_mca_state_dvm.la 6783 make[4]: Leaving directory '$BUILD_DIR/work/3rd-party/prrte/src/mca/state/dvm' 6784 Making all in mca/state/prted 6785 make[4]: Entering directory '$BUILD_DIR/work/3rd-party/prrte/src/mca/state/prted' 6787 CC state_prted.lo 6786 CC state_prted.lo 6788 CCLD prte_mca_state_prted.la logs/good.strip.txt --- 40/96 --- Text 6807 make[4]: Nothing to be done for 'all'. 6808 make[4]: Leaving directory '$BUILD_DIR/work/3rd-party/prrte/src/tools/pcc' 6809 Making all in tools/prte_info 6810 make[4]: Entering directory '$BUILD_DIR/work/3rd-party/prrte/src/tools/prte_info' 6812 CC output.o 6811 CC output.o 6813 CC param.o logs/good.strip.txt --- 41/96 --- Text 7056 make[3]: Leaving directory '$BUILD_DIR/work/3rd-party/romio341' 7057 make[2]: Leaving directory '$BUILD_DIR/work/3rd-party/romio341' 7058 Making all in treematch 7059 make[2]: Entering directory '$BUILD_DIR/work/3rd-party/treematch' 7061 CC tm_mt.lo 7060 CC tm_mt.lo 7062 CC fibo.lo logs/good.strip.txt --- 42/96 --- Text 7168 make[3]: Leaving directory '$BUILD_DIR/work/opal/util' 7169 make[2]: Leaving directory '$BUILD_DIR/work/opal/util' 7170 Making all in mca/base 7171 make[2]: Entering directory '$BUILD_DIR/work/opal/mca/base' 7173 CC mca_base_alias.lo 7172 CC mca_base_alias.lo 7174 CC mca_base_cmd_line.lo logs/good.strip.txt --- 43/96 --- Text 7227 CCLD libmca_dl.la 7228 make[2]: Leaving directory '$BUILD_DIR/work/opal/mca/dl' 7229 Making all in mca/hwloc 7230 make[2]: Entering directory '$BUILD_DIR/work/opal/mca/hwloc' 7232 CC base/hwloc_base_util.lo 7231 CC base/hwloc_base_util.lo 7233 CC base/hwloc_base_maffinity.lo logs/good.strip.txt --- 44/96 --- Text 7239 CCLD libmca_if.la 7240 make[2]: Leaving directory '$BUILD_DIR/work/opal/mca/if' 7241 Making all in mca/installdirs 7242 make[2]: Entering directory '$BUILD_DIR/work/opal/mca/installdirs' 7244 CC base/installdirs_base_expand.lo 7243 CC base/installdirs_base_expand.lo 7245 CCLD libmca_installdirs.la logs/good.strip.txt --- 45/96 --- Text 7285 CCLD libmca_pmix.la 7286 make[2]: Leaving directory '$BUILD_DIR/work/opal/mca/pmix' 7287 Making all in mca/rcache 7288 make[2]: Entering directory '$BUILD_DIR/work/opal/mca/rcache' 7290 CC base/rcache_base_create.lo 7289 CC base/rcache_base_create.lo 7291 CC base/rcache_base_vma.lo logs/good.strip.txt --- 46/96 --- Text 7427 CCLD mca_accelerator_null.la 7428 make[2]: Leaving directory '$BUILD_DIR/work/opal/mca/accelerator/null' 7429 Making all in mca/accelerator/cuda 7430 make[2]: Entering directory '$BUILD_DIR/work/opal/mca/accelerator/cuda' 7432 CC accelerator_cuda_component.lo 7431 CC accelerator_cuda_component.lo 7433 CCLD mca_accelerator_cuda.la logs/good.strip.txt --- 47/96 --- Text 7497 CCLD mca_mpool_hugepage.la 7498 make[2]: Leaving directory '$BUILD_DIR/work/opal/mca/mpool/hugepage' 7499 Making all in mca/patcher/overwrite 7500 make[2]: Entering directory '$BUILD_DIR/work/opal/mca/patcher/overwrite' 7502 CC patcher_overwrite_component.lo 7501 CC patcher_overwrite_component.lo 7503 CCLD mca_patcher_overwrite.la logs/good.strip.txt --- 48/96 --- Text 7569 make[3]: Leaving directory '$BUILD_DIR/work/ompi/include' 7570 make[2]: Leaving directory '$BUILD_DIR/work/ompi/include' 7571 Making all in datatype 7572 make[2]: Entering directory '$BUILD_DIR/work/ompi/datatype' 7574 CC ompi_datatype_create.lo 7573 CC ompi_datatype_create.lo 7575 CC ompi_datatype_create_contiguous.lo logs/good.strip.txt --- 49/96 --- Text 7587 CCLD libdatatype.la 7588 make[2]: Leaving directory '$BUILD_DIR/work/ompi/datatype' 7589 Making all in debuggers 7590 make[2]: Entering directory '$BUILD_DIR/work/ompi/debuggers' 7592 CC libdebuggers_la-ompi_debuggers.lo 7591 CC libdebuggers_la-ompi_debuggers.lo 7593 CC libompi_dbg_msgq_la-ompi_msgq_dll.lo logs/good.strip.txt --- 50/96 --- Text 8044 CCLD libmpi_c.la 8045 make[2]: Leaving directory '$BUILD_DIR/work/ompi/mpi/c' 8046 Making all in mpi/tool 8047 make[2]: Entering directory '$BUILD_DIR/work/ompi/mpi/tool' 8049 CC mpit_common.lo 8048 CC mpit_common.lo 8050 CC libmpi_mpit_profile_la-category_get_categories.lo logs/good.strip.txt --- 51/96 --- Text 8426 Making all in mpi/fortran/mpif-h 8427 make[2]: Entering directory '$BUILD_DIR/work/ompi/mpi/fortran/mpif-h' 8428 Making all in profile 8429 make[3]: Entering directory '$BUILD_DIR/work/ompi/mpi/fortran/mpif-h/profile' 8431 LN_S pabort_f.c 8430 LN_S pabort_f.c 8432 LN_S padd_error_code_f.c logs/good.strip.txt --- 52/96 --- Text 8442 LN_S pallreduce_init_f.c 8443 LN_S palltoall_f.c 8444 LN_S palltoall_init_f.c 8445 LN_S palltoallv_f.c 8448 LN_S palltoallv_init_f.c 8450 LN_S pattr_delete_f.c 8446 LN_S palltoallv_init_f.c 8449 LN_S pattr_delete_f.c 8451 LN_S pattr_put_f.c logs/good.strip.txt --- 53/96 --- Text 8537 LN_S pfile_iread_shared_f.c 8538 LN_S pfile_iwrite_at_f.c 8539 LN_S pfile_iwrite_f.c 8540 LN_S pfile_iwrite_at_all_f.c 8542 LN_S pfile_iwrite_all_f.c 8541 LN_S pfile_iwrite_all_f.c 8543 LN_S pfile_open_f.c logs/good.strip.txt --- 54/96 --- Text 8551 LN_S pfile_read_at_f.c 8552 LN_S pfile_read_f.c 8553 LN_S pfile_read_ordered_begin_f.c 8554 LN_S pfile_read_ordered_end_f.c 8556 LN_S pfile_read_ordered_f.c 8560 LN_S pfile_set_errhandler_f.c 8555 LN_S pfile_read_ordered_f.c 8559 LN_S pfile_set_errhandler_f.c 8561 LN_S pfile_set_info_f.c logs/good.strip.txt --- 55/96 --- Text 8595 LN_S pgraph_neighbors_count_f.c 8596 LN_S pgraph_neighbors_f.c 8597 LN_S pgrequest_complete_f.c 8598 LN_S pgrequest_start_f.c 8600 LN_S pgroup_compare_f.c 8599 LN_S pgroup_compare_f.c 8601 LN_S pgroup_excl_f.c logs/good.strip.txt --- 56/96 --- Text 8639 LN_S pinfo_get_string_f.c 8640 LN_S pinfo_get_valuelen_f.c 8641 LN_S pinfo_set_f.c 8642 LN_S pinit_f.c 8644 LN_S pinitialized_f.c 8643 LN_S pinitialized_f.c 8645 LN_S pintercomm_create_f.c logs/good.strip.txt --- 57/96 --- Text 8764 LN_S ptype_get_extent_f.c 8765 LN_S ptype_get_extent_x_f.c 8766 LN_S ptype_get_name_f.c 8767 LN_S ptype_get_true_extent_f.c 8769 LN_S ptype_get_true_extent_x_f.c 8768 LN_S ptype_get_true_extent_x_f.c 8770 LN_S ptype_match_size_f.c logs/good.strip.txt --- 58/96 --- Text 8832 LN_S pwin_flush_local_all_f.c 8833 LN_S paddress_f.c 8834 LN_S perrhandler_create_f.c 8835 LN_S perrhandler_get_f.c 8837 LN_S ptype_extent_f.c 8836 LN_S ptype_extent_f.c 8838 LN_S ptype_hindexed_f.c logs/good.strip.txt --- 59/96 --- Text 9271 FCLD libusempi_internal_modules.la 9272 make[2]: Leaving directory '$BUILD_DIR/work/ompi/mpi/fortran/use-mpi' 9273 Making all in mpi/fortran/use-mpi-ignore-tkr 9274 make[2]: Entering directory '$BUILD_DIR/work/ompi/mpi/fortran/use-mpi-ignore-tkr' 9276 GENERATE mpi-ignore-tkr-sizeof.f90 9278 FC mpi-ignore-tkr-sizeof.lo 9275 GENERATE mpi-ignore-tkr-sizeof.f90 9277 FC mpi-ignore-tkr-sizeof.lo 9279 FCLD libmpi_usempi_ignore_tkr.la logs/good.strip.txt --- 60/96 --- Text 9343 LN_S palloc_mem_f08.F90 9344 LN_S pallreduce_f08.F90 9345 LN_S palltoall_f08.F90 9346 LN_S palltoall_init_f08.F90 9348 LN_S palltoallv_init_f08.F90 9347 LN_S palltoallv_init_f08.F90 9349 LN_S palltoallw_f08.F90 logs/good.strip.txt --- 61/96 --- Text 9388 LN_S pcomm_get_name_f08.F90 9389 LN_S pcomm_get_parent_f08.F90 9390 LN_S pcomm_group_f08.F90 9391 LN_S pcomm_join_f08.F90 9393 LN_S pcomm_rank_f08.F90 9392 LN_S pcomm_rank_f08.F90 9394 LN_S pcomm_remote_size_f08.F90 logs/good.strip.txt --- 62/96 --- Text 9397 LN_S pcomm_set_info_f08.F90 9398 LN_S pcomm_set_name_f08.F90 9399 LN_S pcomm_size_f08.F90 9400 LN_S pcomm_spawn_f08.F90 9402 LN_S pcomm_spawn_multiple_f08.F90 9406 LN_S pcompare_and_swap_f08.F90 9401 LN_S pcomm_spawn_multiple_f08.F90 9405 LN_S pcompare_and_swap_f08.F90 9407 LN_S pdist_graph_create_adjacent_f08.F90 logs/good.strip.txt --- 63/96 --- Text 9459 LN_S pfile_set_atomicity_f08.F90 9460 LN_S pfile_set_errhandler_f08.F90 9461 LN_S pfile_set_info_f08.F90 9462 LN_S pfile_set_size_f08.F90 9464 LN_S pfile_set_view_f08.F90 9463 LN_S pfile_set_view_f08.F90 9465 LN_S pfile_write_all_begin_f08.F90 logs/good.strip.txt --- 64/96 --- Text 9487 LN_S pget_elements_f08.F90 9488 LN_S pget_elements_x_f08.F90 9489 LN_S pget_f08.F90 9490 LN_S pget_library_version_f08.F90 9492 LN_S pget_processor_name_f08.F90 9491 LN_S pget_processor_name_f08.F90 9493 LN_S pgraph_create_f08.F90 logs/good.strip.txt --- 65/96 --- Text 9595 LN_S preduce_scatter_init_f08.F90 9596 LN_S preduce_scatter_block_f08.F90 9597 LN_S preduce_scatter_block_init_f08.F90 9598 LN_S pregister_datarep_f08.F90 9600 LN_S prequest_free_f08.F90 9599 LN_S prequest_free_f08.F90 9601 LN_S prget_f08.F90 logs/good.strip.txt --- 66/96 --- Text 9600 LN_S prequest_free_f08.F90 9601 LN_S prget_f08.F90 9602 LN_S prget_accumulate_f08.F90 9603 LN_S prput_f08.F90 9605 LN_S prsend_f08.F90 9609 LN_S pscatter_f08.F90 9604 LN_S prsend_f08.F90 9608 LN_S pscatter_f08.F90 9610 LN_S pscatterv_f08.F90 logs/good.strip.txt --- 67/96 --- Text 9657 LN_S ptype_free_keyval_f08.F90 9658 LN_S ptype_get_attr_f08.F90 9659 LN_S ptype_get_contents_f08.F90 9660 LN_S ptype_get_envelope_f08.F90 9662 LN_S ptype_get_extent_f08.F90 9661 LN_S ptype_get_extent_f08.F90 9663 LN_S ptype_get_name_f08.F90 logs/good.strip.txt --- 68/96 --- Text 9697 LN_S pwin_free_keyval_f08.F90 9698 LN_S pwin_get_attr_f08.F90 9699 LN_S pwin_get_errhandler_f08.F90 9700 LN_S pwin_get_group_f08.F90 9702 LN_S pwin_get_info_f08.F90 9701 LN_S pwin_get_info_f08.F90 9703 LN_S pwin_lock_f08.F90 logs/good.strip.txt --- 69/96 --- Text 9712 LN_S pwin_sync_f08.F90 9713 LN_S pwin_test_f08.F90 9714 LN_S pwin_unlock_f08.F90 9715 LN_S pwin_unlock_all_f08.F90 9717 LN_S pwin_wait_f08.F90 9716 LN_S pwin_wait_f08.F90 9718 PPFC paccumulate_f08.lo logs/good.strip.txt --- 70/96 --- Text 10223 PPFC file_read_at_all_begin_f08.lo 10224 PPFC file_read_at_all_end_f08.lo 10225 PPFC file_read_at_all_f08.lo 10226 PPFC file_read_at_f08.lo 10228 PPFC file_read_f08.lo 10227 PPFC file_read_f08.lo 10229 PPFC file_read_ordered_end_f08.lo logs/good.strip.txt --- 71/96 --- Text 10385 PPFC rget_accumulate_f08.lo 10386 PPFC rput_f08.lo 10387 PPFC rsend_f08.lo 10388 PPFC rsend_init_f08.lo 10390 PPFC scan_init_f08.lo 10389 PPFC scan_init_f08.lo 10391 PPFC scatter_f08.lo logs/good.strip.txt --- 72/96 --- Text 10537 CCLD libmca_common_ompio.la 10538 make[2]: Leaving directory '$BUILD_DIR/work/ompi/mca/common/ompio' 10539 Making all in mca/bml/r2 10540 make[2]: Entering directory '$BUILD_DIR/work/ompi/mca/bml/r2' 10542 CC bml_r2.lo 10541 CC bml_r2.lo 10543 CCLD mca_bml_r2.la logs/good.strip.txt --- 73/96 --- Text 10781 CCLD mca_coll_sm.la 10782 make[2]: Leaving directory '$BUILD_DIR/work/ompi/mca/coll/sm' 10783 Making all in mca/fbtl/posix 10784 make[2]: Entering directory '$BUILD_DIR/work/ompi/mca/fbtl/posix' 10786 CC fbtl_posix_component.lo 10785 CC fbtl_posix_component.lo 10787 CC fbtl_posix_preadv.lo logs/good.strip.txt --- 74/96 --- Text 10800 CCLD mca_fcoll_dynamic.la 10801 make[2]: Leaving directory '$BUILD_DIR/work/ompi/mca/fcoll/dynamic' 10802 Making all in mca/fcoll/dynamic_gen2 10803 make[2]: Entering directory '$BUILD_DIR/work/ompi/mca/fcoll/dynamic_gen2' 10805 CC fcoll_dynamic_gen2_module.lo 10804 CC fcoll_dynamic_gen2_module.lo 10806 CC fcoll_dynamic_gen2_file_read_all.lo logs/good.strip.txt --- 75/96 --- Text 10920 CCLD mca_pml_cm.la 10921 make[2]: Leaving directory '$BUILD_DIR/work/ompi/mca/pml/cm' 10922 Making all in mca/pml/monitoring 10923 make[2]: Entering directory '$BUILD_DIR/work/ompi/mca/pml/monitoring' 10925 CC pml_monitoring_component.lo 10924 CC pml_monitoring_component.lo 10926 CC pml_monitoring_iprobe.lo logs/good.strip.txt --- 76/96 --- Text 11189 CCLD libmca_memheap.la 11190 make[2]: Leaving directory '$BUILD_DIR/work/oshmem/mca/memheap' 11191 Making all in mca/scoll 11192 make[2]: Entering directory '$BUILD_DIR/work/oshmem/mca/scoll' 11194 CC base/scoll_base_available.lo 11193 CC base/scoll_base_available.lo 11195 CC base/scoll_base_select.lo logs/good.strip.txt --- 77/96 --- Text 11282 CCLD mca_spml_ucx.la 11283 make[2]: Leaving directory '$BUILD_DIR/work/oshmem/mca/spml/ucx' 11284 Making all in mca/sshmem/mmap 11285 make[2]: Entering directory '$BUILD_DIR/work/oshmem/mca/sshmem/mmap' 11287 CC sshmem_mmap_component.lo 11286 CC sshmem_mmap_component.lo 11288 CCLD mca_sshmem_mmap.la logs/good.strip.txt --- 78/96 --- Text 11288 CCLD mca_sshmem_mmap.la 11289 make[2]: Leaving directory '$BUILD_DIR/work/oshmem/mca/sshmem/mmap' 11290 Making all in mca/sshmem/sysv 11291 make[2]: Entering directory '$BUILD_DIR/work/oshmem/mca/sshmem/sysv' 11293 CC sshmem_sysv_module.lo 11292 CC sshmem_sysv_module.lo 11294 CCLD mca_sshmem_sysv.la logs/good.strip.txt --- 79/96 --- Text 11733 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libpmix.so.2.9.4 libpmix.so.2 || { rm -f libpmix.so.2 && ln -s libpmix.so.2.9.4 libpmix.so.2; }; }) 11734 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libpmix.so.2.9.4 libpmix.so || { rm -f libpmix.so && ln -s libpmix.so.2.9.4 libpmix.so; }; }) 11735 libtool: install: /usr/bin/install -c .libs/libpmix.lai $BUILD_DIR/_h_env/lib/libpmix.la 11736 libtool: finish: PATH="$BUILD_DIR/_build_env/bin:$BUILD_DIR/_h_env/bin:/opt/conda/condabin:/opt/conda/bin:/opt/conda/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/conda/bin:/usr/local/cuda/bin:/sbin" ldconfig -n $BUILD_DIR/_h_env/lib 11737 ldconfig: $BUILD_DIR/_h_env/lib/ is not a symbolic link 11738 11737 ---------------------------------------------------------------------- logs/good.strip.txt --- 80/96 --- Text 11786 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libpmix_mca_common_dstore.so.1.0.4 libpmix_mca_common_dstore.so.1 || { rm -f libpmix_mca_common_dstore.so.1 && ln -s libpmix_mca_common_dstore.so.1.0.4 libpmix_mca_common_dstore.so.1; }; }) 11787 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libpmix_mca_common_dstore.so.1.0.4 libpmix_mca_common_dstore.so || { rm -f libpmix_mca_common_dstore.so && ln -s libpmix_mca_common_dstore.so.1.0.4 libpmix_mca_common_dstore.so; }; }) 11788 libtool: install: /usr/bin/install -c .libs/libpmix_mca_common_dstore.lai $BUILD_DIR/_h_env/lib/libpmix_mca_common_dstore.la 11789 libtool: finish: PATH="$BUILD_DIR/_build_env/bin:$BUILD_DIR/_h_env/bin:/opt/conda/condabin:/opt/conda/bin:/opt/conda/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/conda/bin:/usr/local/cuda/bin:/sbin" ldconfig -n $BUILD_DIR/_h_env/lib 11790 ldconfig: $BUILD_DIR/_h_env/lib/ is not a symbolic link 11791 11788 ---------------------------------------------------------------------- logs/good.strip.txt --- 81/96 --- Text 13292 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libprrte.so.3.0.3 libprrte.so.3 || { rm -f libprrte.so.3 && ln -s libprrte.so.3.0.3 libprrte.so.3; }; }) 13293 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libprrte.so.3.0.3 libprrte.so || { rm -f libprrte.so && ln -s libprrte.so.3.0.3 libprrte.so; }; }) 13294 libtool: install: /usr/bin/install -c .libs/libprrte.lai $BUILD_DIR/_h_env/lib/libprrte.la 13295 libtool: finish: PATH="$BUILD_DIR/_build_env/bin:$BUILD_DIR/_h_env/bin:/opt/conda/condabin:/opt/conda/bin:/opt/conda/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/conda/bin:/usr/local/cuda/bin:/sbin" ldconfig -n $BUILD_DIR/_h_env/lib 13296 ldconfig: $BUILD_DIR/_h_env/lib/ is not a symbolic link 13297 13292 ---------------------------------------------------------------------- logs/good.strip.txt --- 82/96 --- Text 14634 make[3]: Entering directory '$BUILD_DIR/work/opal' 14635 /usr/bin/mkdir -p '$BUILD_DIR/_h_env/lib' 14636 /bin/sh ../libtool --mode=install /usr/bin/install -c libopen-pal.la '$BUILD_DIR/_h_env/lib' 14637 libtool: warning: relinking 'libopen-pal.la' 14638 libtool: install: (cd $BUILD_DIR/work/opal; /bin/sh "$BUILD_DIR/work/libtool" --silent --tag CC --mode=relink x86_64-conda-linux-gnu-cc -DOPAL_CONFIGURE_HOST=\"0112a720bc5a\" -DNDEBUG -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem $BUILD_DIR/_h_env/include -fdebug-prefix-map=$BUILD_DIR/work=/usr/local/src/conda/openmpi-5.0.1 -fdebug-prefix-map=$BUILD_DIR/_h_env=/usr/local/src/conda-prefix -isystem /usr/local/cuda/include -finline-functions -version-info 80:1:0 -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,$BUILD_DIR/_h_env/lib -Wl,-rpath-link,$BUILD_DIR/_h_env/lib -L$BUILD_DIR/_h_env/lib -L$BUILD_DIR/_h_env/lib -L$BUILD_DIR/_h_env/lib -o libopen-pal.la -rpath $BUILD_DIR/_h_env/lib memoryhooks/memory.lo runtime/opal_params.lo runtime/opal_progress.lo runtime/opal_finalize.lo runtime/opal_init.lo runtime/opal_progress_threads.lo libopen-pal_core.la datatype/libdatatype.la util/libopalutil.la mca/accelerator/libmca_accelerator.la mca/allocator/libmca_allocator.la mca/btl/libmca_btl.la mca/hwloc/libmca_hwloc.la mca/if/libmca_if.la mca/if/posix_ipv4/libmca_if_posix_ipv4.la mca/if/linux_ipv6/libmca_if_linux_ipv6.la mca/memchecker/libmca_memchecker.la mca/memcpy/libmca_memcpy.la mca/memory/libmca_memory.la mca/memory/patcher/libmca_memory_patcher.la mca/mpool/libmca_mpool.la mca/patcher/libmca_patcher.la mca/pmix/libmca_pmix.la mca/rcache/libmca_rcache.la mca/reachable/libmca_reachable.la mca/shmem/libmca_shmem.la mca/smsc/libmca_smsc.la -lpthread -lrt -lm -lutil -levent_core -levent_pthreads -lhwloc $BUILD_DIR/work/3rd-party/openpmix/src/libpmix.la ) 14632 libtool: install: (cd $BUILD_DIR/work/opal; /bin/sh "$BUILD_DIR/work/libtool" --silent --tag CC --mode=relink x86_64-conda-linux-gnu-cc -DOPAL_CONFIGURE_HOST=\"bfb2a6efbd18\" -DNDEBUG -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem $BUILD_DIR/_h_env/include -fdebug-prefix-map=$BUILD_DIR/work=/usr/local/src/conda/openmpi-5.0.1 -fdebug-prefix-map=$BUILD_DIR/_h_env=/usr/local/src/conda-prefix -isystem /usr/local/cuda/include -finline-functions -version-info 80:1:0 -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,$BUILD_DIR/_h_env/lib -Wl,-rpath-link,$BUILD_DIR/_h_env/lib -L$BUILD_DIR/_h_env/lib -L$BUILD_DIR/_h_env/lib -L$BUILD_DIR/_h_env/lib -o libopen-pal.la -rpath $BUILD_DIR/_h_env/lib memoryhooks/memory.lo runtime/opal_params.lo runtime/opal_progress.lo runtime/opal_finalize.lo runtime/opal_init.lo runtime/opal_progress_threads.lo libopen-pal_core.la datatype/libdatatype.la util/libopalutil.la mca/accelerator/libmca_accelerator.la mca/allocator/libmca_allocator.la mca/btl/libmca_btl.la mca/hwloc/libmca_hwloc.la mca/if/libmca_if.la mca/if/posix_ipv4/libmca_if_posix_ipv4.la mca/if/linux_ipv6/libmca_if_linux_ipv6.la mca/memchecker/libmca_memchecker.la mca/memcpy/libmca_memcpy.la mca/memory/libmca_memory.la mca/memory/patcher/libmca_memory_patcher.la mca/mpool/libmca_mpool.la mca/patcher/libmca_patcher.la mca/pmix/libmca_pmix.la mca/rcache/libmca_rcache.la mca/reachable/libmca_reachable.la mca/shmem/libmca_shmem.la mca/smsc/libmca_smsc.la -lpthread -lrt -lm -lutil -levent_core -levent_pthreads -lhwloc $BUILD_DIR/work/3rd-party/openpmix/src/libpmix.la ) 14633 libtool: install: /usr/bin/install -c .libs/libopen-pal.so.80.0.1T $BUILD_DIR/_h_env/lib/libopen-pal.so.80.0.1 logs/good.strip.txt --- 83/96 --- Text 14640 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libopen-pal.so.80.0.1 libopen-pal.so.80 || { rm -f libopen-pal.so.80 && ln -s libopen-pal.so.80.0.1 libopen-pal.so.80; }; }) 14641 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libopen-pal.so.80.0.1 libopen-pal.so || { rm -f libopen-pal.so && ln -s libopen-pal.so.80.0.1 libopen-pal.so; }; }) 14642 libtool: install: /usr/bin/install -c .libs/libopen-pal.lai $BUILD_DIR/_h_env/lib/libopen-pal.la 14643 libtool: finish: PATH="$BUILD_DIR/_build_env/bin:$BUILD_DIR/_h_env/bin:/opt/conda/condabin:/opt/conda/bin:/opt/conda/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/conda/bin:/usr/local/cuda/bin:/sbin" ldconfig -n $BUILD_DIR/_h_env/lib 14644 ldconfig: $BUILD_DIR/_h_env/lib/ is not a symbolic link 14645 14638 ---------------------------------------------------------------------- logs/good.strip.txt --- 84/96 --- Text 14677 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libopen-palmca_common_sm.so.80.0.0 libopen-palmca_common_sm.so.80 || { rm -f libopen-palmca_common_sm.so.80 && ln -s libopen-palmca_common_sm.so.80.0.0 libopen-palmca_common_sm.so.80; }; }) 14678 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libopen-palmca_common_sm.so.80.0.0 libopen-palmca_common_sm.so || { rm -f libopen-palmca_common_sm.so && ln -s libopen-palmca_common_sm.so.80.0.0 libopen-palmca_common_sm.so; }; }) 14679 libtool: install: /usr/bin/install -c .libs/libopen-palmca_common_sm.lai $BUILD_DIR/_h_env/lib/libopen-palmca_common_sm.la 14680 libtool: finish: PATH="$BUILD_DIR/_build_env/bin:$BUILD_DIR/_h_env/bin:/opt/conda/condabin:/opt/conda/bin:/opt/conda/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/conda/bin:/usr/local/cuda/bin:/sbin" ldconfig -n $BUILD_DIR/_h_env/lib 14681 ldconfig: $BUILD_DIR/_h_env/lib/ is not a symbolic link 14682 14673 ---------------------------------------------------------------------- logs/good.strip.txt --- 85/96 --- Text 14714 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libopen-palmca_common_ucx.so.80.0.0 libopen-palmca_common_ucx.so.80 || { rm -f libopen-palmca_common_ucx.so.80 && ln -s libopen-palmca_common_ucx.so.80.0.0 libopen-palmca_common_ucx.so.80; }; }) 14715 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libopen-palmca_common_ucx.so.80.0.0 libopen-palmca_common_ucx.so || { rm -f libopen-palmca_common_ucx.so && ln -s libopen-palmca_common_ucx.so.80.0.0 libopen-palmca_common_ucx.so; }; }) 14716 libtool: install: /usr/bin/install -c .libs/libopen-palmca_common_ucx.lai $BUILD_DIR/_h_env/lib/libopen-palmca_common_ucx.la 14717 libtool: finish: PATH="$BUILD_DIR/_build_env/bin:$BUILD_DIR/_h_env/bin:/opt/conda/condabin:/opt/conda/bin:/opt/conda/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/conda/bin:/usr/local/cuda/bin:/sbin" ldconfig -n $BUILD_DIR/_h_env/lib 14718 ldconfig: $BUILD_DIR/_h_env/lib/ is not a symbolic link 14719 14708 ---------------------------------------------------------------------- logs/good.strip.txt --- 86/96 --- Text 15595 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libmpi.so.40.40.1 libmpi.so.40 || { rm -f libmpi.so.40 && ln -s libmpi.so.40.40.1 libmpi.so.40; }; }) 15596 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libmpi.so.40.40.1 libmpi.so || { rm -f libmpi.so && ln -s libmpi.so.40.40.1 libmpi.so; }; }) 15597 libtool: install: /usr/bin/install -c .libs/libmpi.lai $BUILD_DIR/_h_env/lib/libmpi.la 15598 libtool: finish: PATH="$BUILD_DIR/_build_env/bin:$BUILD_DIR/_h_env/bin:/opt/conda/condabin:/opt/conda/bin:/opt/conda/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/conda/bin:/usr/local/cuda/bin:/sbin" ldconfig -n $BUILD_DIR/_h_env/lib 15599 ldconfig: $BUILD_DIR/_h_env/lib/ is not a symbolic link 15600 15587 ---------------------------------------------------------------------- logs/good.strip.txt --- 87/96 --- Text 15647 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libmpi_mpifh.so.40.40.0 libmpi_mpifh.so.40 || { rm -f libmpi_mpifh.so.40 && ln -s libmpi_mpifh.so.40.40.0 libmpi_mpifh.so.40; }; }) 15648 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libmpi_mpifh.so.40.40.0 libmpi_mpifh.so || { rm -f libmpi_mpifh.so && ln -s libmpi_mpifh.so.40.40.0 libmpi_mpifh.so; }; }) 15649 libtool: install: /usr/bin/install -c .libs/libmpi_mpifh.lai $BUILD_DIR/_h_env/lib/libmpi_mpifh.la 15650 libtool: finish: PATH="$BUILD_DIR/_build_env/bin:$BUILD_DIR/_h_env/bin:/opt/conda/condabin:/opt/conda/bin:/opt/conda/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/conda/bin:/usr/local/cuda/bin:/sbin" ldconfig -n $BUILD_DIR/_h_env/lib 15651 ldconfig: $BUILD_DIR/_h_env/lib/ is not a symbolic link 15652 15637 ---------------------------------------------------------------------- logs/good.strip.txt --- 88/96 --- Text 15692 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libmpi_usempi_ignore_tkr.so.40.40.0 libmpi_usempi_ignore_tkr.so.40 || { rm -f libmpi_usempi_ignore_tkr.so.40 && ln -s libmpi_usempi_ignore_tkr.so.40.40.0 libmpi_usempi_ignore_tkr.so.40; }; }) 15693 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libmpi_usempi_ignore_tkr.so.40.40.0 libmpi_usempi_ignore_tkr.so || { rm -f libmpi_usempi_ignore_tkr.so && ln -s libmpi_usempi_ignore_tkr.so.40.40.0 libmpi_usempi_ignore_tkr.so; }; }) 15694 libtool: install: /usr/bin/install -c .libs/libmpi_usempi_ignore_tkr.lai $BUILD_DIR/_h_env/lib/libmpi_usempi_ignore_tkr.la 15695 libtool: finish: PATH="$BUILD_DIR/_build_env/bin:$BUILD_DIR/_h_env/bin:/opt/conda/condabin:/opt/conda/bin:/opt/conda/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/conda/bin:/usr/local/cuda/bin:/sbin" ldconfig -n $BUILD_DIR/_h_env/lib 15696 ldconfig: $BUILD_DIR/_h_env/lib/ is not a symbolic link 15697 15680 ---------------------------------------------------------------------- logs/good.strip.txt --- 89/96 --- Text 15784 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libmpi_usempif08.so.40.40.0 libmpi_usempif08.so.40 || { rm -f libmpi_usempif08.so.40 && ln -s libmpi_usempif08.so.40.40.0 libmpi_usempif08.so.40; }; }) 15785 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libmpi_usempif08.so.40.40.0 libmpi_usempif08.so || { rm -f libmpi_usempif08.so && ln -s libmpi_usempif08.so.40.40.0 libmpi_usempif08.so; }; }) 15786 libtool: install: /usr/bin/install -c .libs/libmpi_usempif08.lai $BUILD_DIR/_h_env/lib/libmpi_usempif08.la 15787 libtool: finish: PATH="$BUILD_DIR/_build_env/bin:$BUILD_DIR/_h_env/bin:/opt/conda/condabin:/opt/conda/bin:/opt/conda/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/conda/bin:/usr/local/cuda/bin:/sbin" ldconfig -n $BUILD_DIR/_h_env/lib 15788 ldconfig: $BUILD_DIR/_h_env/lib/ is not a symbolic link 15789 15770 ---------------------------------------------------------------------- logs/good.strip.txt --- 90/96 --- Text 15841 libtool: install: (cd $BUILD_DIR/work/ompi/mca/common/monitoring; /bin/sh "$BUILD_DIR/work/libtool" --silent --tag CC --mode=relink x86_64-conda-linux-gnu-cc -DNDEBUG -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem $BUILD_DIR/_h_env/include -fdebug-prefix-map=$BUILD_DIR/work=/usr/local/src/conda/openmpi-5.0.1 -fdebug-prefix-map=$BUILD_DIR/_h_env=/usr/local/src/conda-prefix -isystem /usr/local/cuda/include -finline-functions -module -avoid-version -shared -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,$BUILD_DIR/_h_env/lib -Wl,-rpath-link,$BUILD_DIR/_h_env/lib -L$BUILD_DIR/_h_env/lib -L$BUILD_DIR/_h_env/lib -L$BUILD_DIR/_h_env/lib -o ompi_monitoring_prof.la -rpath $BUILD_DIR/_h_env/lib monitoring_prof.lo monitoring_prof_f.lo ../../../../ompi/libmpi.la ../../../../opal/libopen-pal.la -lpthread -lrt -lm -lutil -levent_core -levent_pthreads -lhwloc $BUILD_DIR/work/3rd-party/openpmix/src/libpmix.la ) 15842 libtool: install: /usr/bin/install -c .libs/ompi_monitoring_prof.soT $BUILD_DIR/_h_env/lib/ompi_monitoring_prof.so 15843 libtool: install: /usr/bin/install -c .libs/ompi_monitoring_prof.lai $BUILD_DIR/_h_env/lib/ompi_monitoring_prof.la 15844 libtool: finish: PATH="$BUILD_DIR/_build_env/bin:$BUILD_DIR/_h_env/bin:/opt/conda/condabin:/opt/conda/bin:/opt/conda/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/conda/bin:/usr/local/cuda/bin:/sbin" ldconfig -n $BUILD_DIR/_h_env/lib 15845 ldconfig: $BUILD_DIR/_h_env/lib/ is not a symbolic link 15846 15825 ---------------------------------------------------------------------- logs/good.strip.txt --- 91/96 --- Text 15877 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libmca_common_ompio.so.80.0.1 libmca_common_ompio.so.80 || { rm -f libmca_common_ompio.so.80 && ln -s libmca_common_ompio.so.80.0.1 libmca_common_ompio.so.80; }; }) 15878 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f libmca_common_ompio.so.80.0.1 libmca_common_ompio.so || { rm -f libmca_common_ompio.so && ln -s libmca_common_ompio.so.80.0.1 libmca_common_ompio.so; }; }) 15879 libtool: install: /usr/bin/install -c .libs/libmca_common_ompio.lai $BUILD_DIR/_h_env/lib/libmca_common_ompio.la 15880 libtool: finish: PATH="$BUILD_DIR/_build_env/bin:$BUILD_DIR/_h_env/bin:/opt/conda/condabin:/opt/conda/bin:/opt/conda/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/conda/bin:/usr/local/cuda/bin:/sbin" ldconfig -n $BUILD_DIR/_h_env/lib 15881 ldconfig: $BUILD_DIR/_h_env/lib/ is not a symbolic link 15882 15859 ---------------------------------------------------------------------- logs/good.strip.txt --- 92/96 --- Text 17198 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f liboshmem.so.40.40.1 liboshmem.so.40 || { rm -f liboshmem.so.40 && ln -s liboshmem.so.40.40.1 liboshmem.so.40; }; }) 17199 libtool: install: (cd $BUILD_DIR/_h_env/lib && { ln -s -f liboshmem.so.40.40.1 liboshmem.so || { rm -f liboshmem.so && ln -s liboshmem.so.40.40.1 liboshmem.so; }; }) 17200 libtool: install: /usr/bin/install -c .libs/liboshmem.lai $BUILD_DIR/_h_env/lib/liboshmem.la 17201 libtool: finish: PATH="$BUILD_DIR/_build_env/bin:$BUILD_DIR/_h_env/bin:/opt/conda/condabin:/opt/conda/bin:/opt/conda/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/conda/bin:/usr/local/cuda/bin:/sbin" ldconfig -n $BUILD_DIR/_h_env/lib 17202 ldconfig: $BUILD_DIR/_h_env/lib/ is not a symbolic link 17203 17178 ---------------------------------------------------------------------- logs/good.strip.txt --- 93/96 --- Text 17713 make[1]: Leaving directory '$BUILD_DIR/work' 17714 + POST_LINK=$BUILD_DIR/_h_env/bin/.openmpi-post-link.sh 17715 + '[' -n --with-ucx=$BUILD_DIR/_h_env ']' 17716 + echo 'setting MCA pml to ^ucx...' 17718 setting MCA pml to ^ucx... 17720 + echo 'setting MCA osc to ^ucx...' 17723 setting MCA mca_base_component_show_load_errors to 0... 17724 setting MCA opal_warn_on_missing_libcuda to 0... 17725 setting MCA opal_cuda_support to 0... 17691 setting MCA pml to ^ucx... 17693 + echo 'setting MCA osc to ^ucx...' 17697 + '[' -n '--with-cuda=/usr/local/cuda --with-cuda-libdir=/usr/local/cuda/lib64/stubs' ']' logs/good.strip.txt --- 94/96 --- Text 17724 setting MCA opal_warn_on_missing_libcuda to 0... 17725 setting MCA opal_cuda_support to 0... 17726 + '[' -n '--with-cuda=/usr/local/cuda --with-cuda-libdir=/usr/local/cuda/lib64/stubs' ']' 17727 + echo 'setting MCA mca_base_component_show_load_errors to 0...' 17699 setting MCA mca_base_component_show_load_errors to 0... 17702 setting MCA opal_warn_on_missing_libcuda to 0... 17705 setting MCA opal_cuda_support to 0... 17706 + echo 'opal_cuda_support = 0' logs/good.strip.txt --- 95/96 --- Text 17734 + '[' -f $BUILD_DIR/_h_env/bin/.openmpi-post-link.sh ']' 17735 + chmod +x $BUILD_DIR/_h_env/bin/.openmpi-post-link.sh 17736 17737 Resource usage statistics from bundling openmpi: 17738 Process count: 24 17739 CPU time: Sys=0:00:10.6, User=0:01:39.2 17740 Memory: 250.1M 17741 Disk usage: 183.1M 17742 Time elapsed: 0:13:01.8 17745 number of files: 3388 17747 Making absolute symlink relative (share/openmpi/shmemCC-wrapper-data.txt -> shmemcxx-wrapper-data.txt :-> shmemc++-wrapper-data.txt) 17712 Process count: 26 17713 CPU time: Sys=0:00:12.2, User=0:01:53.1 17714 Memory: 278.6M 17715 Disk usage: 184.0M 17716 Time elapsed: 0:14:01.4 17719 number of files: 3386 17720 Making absolute symlink relative (share/openmpi/shmemCC-wrapper-data.txt -> shmemcxx-wrapper-data.txt :-> shmemc++-wrapper-data.txt) 17722 Warning: rpath $BUILD_DIR/_build_env/lib is outside prefix $BUILD_DIR/_h_env (removing it) logs/good.strip.txt --- 96/96 --- Text 17876 Warning: rpath $BUILD_DIR/_build_env/lib is outside prefix $BUILD_DIR/_h_env (removing it) 17877 Warning: rpath $BUILD_DIR/_build_env/lib is outside prefix $BUILD_DIR/_h_env (removing it) 17878 Warning: rpath $BUILD_DIR/_build_env/lib is outside prefix $BUILD_DIR/_h_env (removing it) 17879 Warning: rpath $BUILD_DIR/_build_env/lib is outside prefix $BUILD_DIR/_h_env (removing it) 17880 Traceback (most recent call last): 17881 File "/opt/conda/lib/python3.10/site-packages/conda_build/os_utils/liefldd.py", line 54, in ensure_binary 17882 return lief.parse(str(file)) 17883 TypeError: '$BUILD_DIR/_h_env/lib/\x01\udce4\x05' 17885 During handling of the above exception, another exception occurred: 17887 Traceback (most recent call last): 17888 File "/opt/conda/bin/conda-mambabuild", line 10, in <module> 17889 sys.exit(main()) 17890 File "/opt/conda/lib/python3.10/site-packages/boa/cli/mambabuild.py", line 256, in main 17891 call_conda_build(action, config) 17892 File "/opt/conda/lib/python3.10/site-packages/boa/cli/mambabuild.py", line 228, in call_conda_build 17893 result = api.build( 17894 File "/opt/conda/lib/python3.10/site-packages/conda_build/api.py", line 254, in build 17895 return build_tree( 17896 File "/opt/conda/lib/python3.10/site-packages/conda_build/build.py", line 3789, in build_tree 17897 packages_from_this = build( 17898 File "/opt/conda/lib/python3.10/site-packages/conda_build/build.py", line 2877, in build 17899 newly_built_packages = bundlers[pkg_type](output_d, m, env, stats) 17900 File "/opt/conda/lib/python3.10/site-packages/conda_build/build.py", line 2004, in bundle_conda 17901 files = post_process_files(metadata, initial_files) 17902 File "/opt/conda/lib/python3.10/site-packages/conda_build/build.py", line 1815, in post_process_files 17903 post_build(m, new_files, build_python=python) 17904 File "/opt/conda/lib/python3.10/site-packages/conda_build/post.py", line 1818, in post_build 17905 post_process_shared_lib(m, f, prefix_files, host_prefix) 17906 File "/opt/conda/lib/python3.10/site-packages/conda_build/post.py", line 1680, in post_process_shared_lib 17907 mk_relative_linux( 17908 File "/opt/conda/lib/python3.10/site-packages/conda_build/post.py", line 612, in mk_relative_linux 17909 existing2, _, _ = get_rpaths_raw(elf) 17910 File "/opt/conda/lib/python3.10/site-packages/conda_build/os_utils/liefldd.py", line 206, in get_rpathy_thing_raw_partial 17911 binary = ensure_binary(file) 17912 File "/opt/conda/lib/python3.10/site-packages/conda_build/os_utils/liefldd.py", line 56, in ensure_binary 17913 print(f"WARNING: liefldd: failed to ensure_binary({file})") 17914 UnicodeEncodeError: 'utf-8' codec can't encode character '\udce4' in position 303: surrogates not allowed 17916 ##[error]Bash exited with code '1'. 17854 Warning: rpath $BUILD_DIR/_build_env/lib is outside prefix $BUILD_DIR/_h_env (removing it) 17857 Warning: rpath $BUILD_DIR/_build_env/lib is outside prefix $BUILD_DIR/_h_env (removing it) 17884 INFO (openmpi,lib/openmpi/mca_osc_sm.so): lib/libopen-pal.so.80 found in this package 17888 INFO (openmpi,lib/openmpi/mca_osc_sm.so): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libm.so.6 found in CDT/compiler package conda-forge/noarch::sysroot_linux-64==2.17=h4a8ded7_13 17889 INFO (openmpi,lib/openmpi/mca_osc_sm.so): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libutil.so.1 found in CDT/compiler package conda-forge/noarch::sysroot_linux-64==2.17=h4a8ded7_13 17890 INFO (openmpi,lib/openmpi/mca_osc_sm.so): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libdl.so.2 found in CDT/compiler package conda-forge/noarch::sysroot_linux-64==2.17=h4a8ded7_13 17891 INFO (openmpi,lib/openmpi/mca_osc_sm.so): Needed DSO lib/libevent_core-2.1.so.7 found in conda-forge/linux-64::libevent==2.1.12=hf998b51_1 17892 INFO (openmpi,lib/openmpi/mca_osc_sm.so): Needed DSO lib/libevent_pthreads-2.1.so.7 found in conda-forge/linux-64::libevent==2.1.12=hf998b51_1 17893 INFO (openmpi,lib/openmpi/mca_osc_sm.so): Needed DSO lib/libhwloc.so.15 found in conda-forge/linux-64::libhwloc==2.9.3=default_h554bfaf_1009 17894 INFO (openmpi,lib/openmpi/mca_osc_sm.so): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libc.so.6 found in CDT/compiler package conda-forge/noarch::sysroot_linux-64==2.17=h4a8ded7_13 17895 INFO (openmpi,lib/pmix/pmix_mca_pshmem_mmap.so): lib/libpmix.so.2 found in this package 17896 INFO (openmpi,lib/pmix/pmix_mca_pshmem_mmap.so): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libm.so.6 found in CDT/compiler package conda-forge/noarch::sysroot_linux-64==2.17=h4a8ded7_13